RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TUSC3Q13454 348 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 BIRC2Q13490 618 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 TFDP1Q14186 410 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 MXD4Q14582 209 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 NECTIN1Q15223 517 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 SLC5A9Q2M3M2 681 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CYP4A22Q5TCH4 519 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 DAB2IPQ5VWQ8 1189 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 LARP1BQ659C4 914 aaKnown RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CREB3L3Q68CJ9 461 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 PLA2G4FQ68DD2 849 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 KIAA1211LQ6NV74 962 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 VHLLQ6RSH7 139 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CCDC91Q7Z6B0 441 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 JAMLQ86YT9 394 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 MFSD6LQ8IWD5 586 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ACRBPQ8NEB7 543 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ATL2Q8NHH9 583 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF461Q8TAF7 563 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CSGALNACT1Q8TDX6 532 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 DEPDC1BQ8WUY9 529 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ERCC4Q92889 916 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-247ENST00000557311 SMARCD2Q92925 531 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 GJA10Q969M2 543 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 E2F7Q96AV8 911 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CPB2Q96IY4 423 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 MAP6Q96JE9 813 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 C22orf23Q9BZE7 217 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 GPR88Q9GZN0 384 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 EPB41L4BQ9H329 900 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 GP6Q9HCN6 339 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 MTRRQ9UBK8 725 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF451Q9Y4E5 1061 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 BACE2Q9Y5Z0 518 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 CHD6Q8TD26 2715 aa5.32□□□□□ -1.56
ATXN3-247ENST00000557311 ZMYM2Q9UBW7 1377 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 DOCK5Q9H7D0 1870 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 WDR27A2RRH5 827 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 CASTOR2A6NHX0 329 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 DBX1A6NMT0 343 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 H0Y8X5 98 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 PRRG1O14668 218 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 EPB41L2O43491 1005 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 TRAPPC3O43617 180 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 PPM1BO75688 479 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 RPP40O75818 363 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 AKAP3O75969 853 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ABLIM3O94929 683 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 THP07101 528 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 CD3EP07766 207 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 CEACAM1P13688 526 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 VAV1P15498 845 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 CEBPBP17676 345 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ARF4P18085 180 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ATF4P18848 351 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 YWHABP31946 246 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 VIPR2P41587 438 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 KPNA1P52294 538 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF445P59923 1031 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 AKAP17AQ02040 695 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 CCDC6Q16204 474 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 FBLN7Q53RD9 439 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ICE2Q659A1 982 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 SLC27A1Q6PCB7 646 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 VITQ6UXI7 678 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ANKS3Q6ZW76 656 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 PDZD4Q76G19 769 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 KBTBD6Q86V97 674 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 C4orf19Q8IY42 314 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 LEMD2Q8NC56 503 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 CCDC148Q8NFR7 591 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 GAB3Q8WWW8 586 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ZC3H10Q96K80 434 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF512Q96ME7 567 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 PAAF1Q9BRP4 392 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 NFKBIZQ9BYH8 718 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 LSG1Q9H089 658 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 SLC6A17Q9H1V8 727 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 SLKQ9H2G2 1235 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 NXF3Q9H4D5 531 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 UPF2Q9HAU5 1272 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 TRPV4Q9HBA0 871 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 RBM12Q9NTZ6 932 aaKnown RBP5.31□□□□□ -1.56
ATXN3-247ENST00000557311 AP5S1Q9NUS5 200 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 WASF3Q9UPY6 502 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 PAXBP1Q9Y5B6 917 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 CDY1Q9Y6F8 540 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 MYH6P13533 1939 aa5.31□□□□□ -1.56
ATXN3-247ENST00000557311 DENND4AQ7Z401 1863 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 KLF18A0A0U1RQI7 1052 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 MYBPHLA2RUH7 354 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 C4orf47A7E2U8 309 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 HEPACAM2A8MVW5 462 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 TMEM189-UBE2V1I3L0A0 370 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 TAF4O00268 1085 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ARNTLO00327 626 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 SMAD7O15105 426 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms