RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 HOXD12P35452 270 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 GNL1P36915 607 aaPredicted RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 STAT6P42226 847 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 GRIA2P42262 883 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 NOVA1P51513 510 aaKnown RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 CASP5P51878 434 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 SEC13P55735 322 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 LMAN2Q12907 356 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 SLC39A14Q15043 492 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 DHCR24Q15392 516 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 GAB4Q2WGN9 574 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 CRTC2Q53ET0 693 aaPredicted RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 EOGTQ5NDL2 527 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 NAIF1Q69YI7 327 aaPredicted RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 PSAPL1Q6NUJ1 521 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 CNNM4Q6P4Q7 775 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 STKLD1Q8NE28 680 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 PDZD8Q8NEN9 1154 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 MYLPFQ96A32 169 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 PNKPQ96T60 521 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 ELOVL4Q9GZR5 314 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 TNMDQ9H2S6 317 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 CUEDC2Q9H467 287 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 PCIF1Q9H4Z3 704 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 TMEM9BQ9NQ34 198 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 CRTAC1Q9NQ79 661 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 POLR3BQ9NW08 1133 aaPredicted RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 COMMD8Q9NX08 183 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 TBC1D7Q9P0N9 293 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 ANKRD11Q6UB99 2663 aaPredicted RBP9.22□□□□□ -0.93
VRK1-206ENST00000557222 DMXL2Q8TDJ6 3036 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 PKD1L2Q7Z442 2459 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 PI4KAP42356 2102 aa9.22□□□□□ -0.93
VRK1-206ENST00000557222 CACNA1EQ15878 2313 aa9.21□□□□□ -0.93
VRK1-206ENST00000557222 THADAQ6YHU6 1953 aa9.21□□□□□ -0.93
VRK1-206ENST00000557222 MYO18AQ92614 2054 aaKnown RBP9.21□□□□□ -0.93
VRK1-206ENST00000557222 E2F8A0AVK6 867 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 UPK3BL1B0FP48 263 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 UPK3BL2E5RIL1 263 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 CDX4O14627 284 aaPredicted RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 ATP2C2O75185 946 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 PRPF6O94906 941 aaKnown RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 RTN3O95197 1032 aaPredicted RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 APODP05090 189 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 CYP17A1P05093 508 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 PDGFRBP09619 1106 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 EPXP11678 715 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 PTPN1P18031 435 aaKnown RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 ATICP31939 592 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 P2RY2P41231 377 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 TUBP50607 506 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 ZXDBP98169 803 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 AMPD3Q01432 767 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 C2orf27AQ580R0 203 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 SNX30Q5VWJ9 437 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 SCARA3Q6AZY7 606 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 TCEAL6Q6IPX3 200 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 ANO7Q6IWH7 933 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 LPCAT2Q7L5N7 544 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 TRAPPC11Q7Z392 1133 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 TRMT11Q7Z4G4 463 aaKnown RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 FILIP1Q7Z7B0 1213 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 OR5B17Q8NGF7 314 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 ZNF507Q8TCN5 953 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 TCEAL3Q969E4 200 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 PCED1BQ96HM7 432 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 SPACA7Q96KW9 195 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 CLIC6Q96NY7 704 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 SLITRK1Q96PX8 696 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 MMS19Q96T76 1030 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 RNF38Q9H0F5 515 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 SNX25Q9H3E2 840 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 SMOC1Q9H4F8 434 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 NEUROD4Q9HD90 331 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 KBTBD4Q9NVX7 518 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 HSPBP1Q9NZL4 362 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 MARK1Q9P0L2 795 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 CGNQ9P2M7 1197 aaKnown RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 KLF15Q9UIH9 416 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 WASF3Q9UPY6 502 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 ASPMQ8IZT6 3477 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 KIAA1549LQ6ZVL6 1849 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 MYO16Q9Y6X6 1858 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 PTPRDP23468 1912 aa9.21□□□□□ -0.94
VRK1-206ENST00000557222 HELZP42694 1942 aaKnown RBP9.21□□□□□ -0.94
VRK1-206ENST00000557222 VPS37CA5D8V6 355 aaPredicted RBP9.2□□□□□ -0.94
VRK1-206ENST00000557222 F8VP50 259 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 HCRTO43612 131 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 KAT7O95251 611 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 YWHAQP27348 245 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 KIR2DL1P43626 348 aaPredicted RBP9.2□□□□□ -0.94
VRK1-206ENST00000557222 PSMC1P62191 440 aaKnown RBP9.2□□□□□ -0.94
VRK1-206ENST00000557222 CYP27A1Q02318 531 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 GAD2Q05329 585 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 TAF10Q12962 218 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 RESTQ13127 1097 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 PSMD6Q15008 389 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 SNRNP35Q16560 246 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms