RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 LOXL4Q96JB6 756 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 FAM81BQ96LP2 452 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 BBS2Q9BXC9 721 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
XRCC3-216ENST00000556682 MARCH2Q9P0N8 246 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 RASAL2Q9UJF2 1139 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 MMP17Q9ULZ9 603 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 KIF26AQ9ULI4 1882 aaPredicted RBP11.33□□□□□ -0.6
XRCC3-216ENST00000556682 ANAPC1Q9H1A4 1944 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 USP34Q70CQ2 3546 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 O00370 1275 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 MDM4O15151 490 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
XRCC3-216ENST00000556682 GREM1O60565 184 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 TULP3O75386 442 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 STC2O76061 302 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 TYRP14679 529 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 SRSF5Q13243 272 aaKnown RBP11.32□□□□□ -0.6
XRCC3-216ENST00000556682 PUM1Q14671 1186 aaKnown RBP eCLIP11.32□□□□□ -0.6
XRCC3-216ENST00000556682 CRY1Q16526 586 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 TPGS1Q6ZTW0 290 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 RRAGAQ7L523 313 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 ENOSF1Q7L5Y1 443 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 ERMP1Q7Z2K6 904 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 C12orf40Q86WS4 652 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 ETFBKMTQ8IXQ9 262 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 CCDC33Q8N5R6 958 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 FAM160A2Q8N612 972 aaPredicted RBP11.32□□□□□ -0.6
XRCC3-216ENST00000556682 TXNDC5Q8NBS9 432 aaKnown RBP11.32□□□□□ -0.6
XRCC3-216ENST00000556682 LMO3Q8TAP4 145 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 GOLGA1Q92805 767 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 ULBP1Q9BZM6 244 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 CNGB3Q9NQW8 809 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 MARK1Q9P0L2 795 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 DACH1Q9UI36 760 aa11.32□□□□□ -0.6
XRCC3-216ENST00000556682 FANCMQ8IYD8 2048 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 SLC12A8A0AV02 714 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 NEDD8-MDP1E9PL57 170 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 M0QYV0 167 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 CACNG3O60359 315 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 RHOBTB1O94844 696 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 CYBBP04839 570 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 KRT5P13647 590 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 LCP1P13796 627 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 HARS2P49590 506 aaKnown RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 MFAP3P55082 362 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 SPEM2Q0P670 501 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 ADIGQ0VDE8 80 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 BYSLQ13895 437 aaKnown RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 E2F5Q15329 346 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 ELF2Q15723 593 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 Q6ZNB5 142 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 SCML4Q8N228 414 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 ALLCQ8N6M5 410 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 TERB1Q8NA31 727 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 IL17RCQ8NAC3 791 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 WBP2Q969T9 261 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 PLD4Q96BZ4 506 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 CNOT6LQ96LI5 555 aaKnown RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 HSFY1Q96LI6 401 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 INTS2Q9H0H0 1204 aaKnown RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 CLSTN2Q9H4D0 955 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 ABCC13Q9NSE7 274 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 SEMA4GQ9NTN9 838 aa11.31□□□□□ -0.6
XRCC3-216ENST00000556682 DNAJC17Q9NVM6 304 aaKnown RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
XRCC3-216ENST00000556682 MYO15AQ9UKN7 3530 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 TULP2O00295 520 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 MED7O43513 233 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 FBXO21O94952 628 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 HMBSP08397 361 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 CORO1AP31146 461 aaKnown RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 KIR2DL1P43626 348 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 DGKGP49619 791 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 CSRP2Q16527 193 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 RSPO4Q2I0M5 234 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 PKDCCQ504Y2 493 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 EMC10Q5UCC4 262 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 BSPRYQ5W0U4 402 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 ANO7Q6IWH7 933 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 GBP6Q6ZN66 633 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 DENND1CQ8IV53 801 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 SLC35F5Q8WV83 523 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 IRGQQ8WZA9 623 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 KAT5Q92993 513 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms