RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 FKBP3Q00688 224 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 GAD2Q05329 585 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SPEM2Q0P670 501 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 INCA1Q0VD86 236 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SRSF5Q13243 272 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 DMC1Q14565 340 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 DHCR24Q15392 516 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 ZCWPW2Q504Y3 356 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 DCAF17Q5H9S7 520 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 C1orf220Q5T0J3 134 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 ZNF658Q5TYW1 1059 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SNX30Q5VWJ9 437 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PKN3Q6P5Z2 889 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SYT13Q7L8C5 426 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 DGLUCYQ7Z3D6 616 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 CACNA2D4Q7Z3S7 1137 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SMYD4Q8IYR2 804 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 ADGRG2Q8IZP9 1017 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 FMR1NBQ8N0W7 255 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 C12orf29Q8N999 325 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 FBXL13Q8NEE6 735 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SCAMP5Q8TAC9 235 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 JAKMIP2Q96AA8 810 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 RMDN1Q96DB5 314 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PNKPQ96T60 521 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 SMOQ99835 787 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 ALG2Q9H553 416 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PNPLA8Q9NP80 782 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 RAB20Q9NX57 234 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 IL37Q9NZH6 218 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 GMIPQ9P107 970 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 HMGXB4Q9UGU5 601 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 LSM7Q9UK45 103 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 CDV3Q9UKY7 258 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 PCDHA5Q9Y5H7 936 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 KIAA1549LQ6ZVL6 1849 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 ATG2BQ96BY7 2078 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 RALGAPA1Q6GYQ0 2036 aa8.12□□□□□ -1.11
HNRNPC-226ENST00000556628 FAM186AA6NE01 2351 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 FAM92AA1XBS5 289 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 PSMA7O14818 248 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 SLC16A3O15427 465 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 TLR5O60602 858 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 CILPO75339 1184 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 BEST1O76090 585 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 ALDH1A2O94788 518 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 APBB3O95704 486 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 IRF1P10914 325 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 ACO1P21399 889 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 OPRD1P41143 372 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 SEC13P55735 322 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 YWHAEP62258 255 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 MRPS21P82921 87 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 ZXDBP98169 803 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 LRRC63Q05C16 580 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 ELF2Q15723 593 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 RSPO4Q2I0M5 234 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 ZNF394Q53GI3 561 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 COBLL1Q53SF7 1204 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 C2orf27AQ580R0 203 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 NAIF1Q69YI7 327 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 CLEC20AQ6ZU45 233 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 TADA2BQ86TJ2 420 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 C12orf50Q8NA57 414 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 ZMIZ2Q8NF64 920 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 TSTD1Q8NFU3 115 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 GAB3Q8WWW8 586 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 EEF2KMTQ96G04 330 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 HEXIM2Q96MH2 286 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 TIGD1Q96MW7 591 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 HHIPQ96QV1 700 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 HNRNPABQ99729 332 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 FAM124BQ9H5Z6 455 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 C2orf42Q9NWW7 574 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 SCML2Q9UQR0 700 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 USP34Q70CQ2 3546 aa8.11□□□□□ -1.11
HNRNPC-226ENST00000556628 TBC1D3BA6NDS4 549 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 GOLGA6L22H0YM25 854 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 SCAMP3O14828 347 aaKnown RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 RHOBTB1O94844 696 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 KAT7O95251 611 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ZDHHC11BP0C7U3 371 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 VSIG8P0DPA2 414 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 RALAP11233 206 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 RARGP13631 454 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 GRIA2P42262 883 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 KDSRQ06136 332 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 CSRP2Q16527 193 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ANO4Q32M45 955 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 HSF5Q4G112 596 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 LY6G5CQ5SRR4 150 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 PPP1R26Q5T8A7 1209 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ANKRD40Q6AI12 368 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ISM2Q6H9L7 571 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 RHBDF2Q6PJF5 856 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 CLEC17AQ6ZS10 378 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 C11orf74Q86VG3 221 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms