RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 SMAD4Q13485 552 aaKnown RBP11.77□□□□□ -0.53
FOXN3-212ENST00000556541 RARS2Q5T160 578 aaKnown RBP11.77□□□□□ -0.53
FOXN3-212ENST00000556541 TMC5Q6UXY8 1006 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 HFE2Q6ZVN8 426 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 REXO1L1PQ8IX06 675 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 DEFB106AQ8N104 65 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 SHKBP1Q8TBC3 707 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 SLC35G2Q8TBE7 412 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 KIAA1524Q8TCG1 905 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 FAM149B1Q96BN6 582 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 TRIM44Q96DX7 344 aaPredicted RBP11.77□□□□□ -0.53
FOXN3-212ENST00000556541 FAM161BQ96MY7 647 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 SERPINB11Q96P15 392 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 DESI2Q9BSY9 194 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 LACRTQ9GZZ8 138 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 TASP1Q9H6P5 420 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 TRPV4Q9HBA0 871 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 OSER1Q9NX31 292 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 OBP2AQ9NY56 170 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.77□□□□□ -0.53
FOXN3-212ENST00000556541 CTTNBP2NLQ9P2B4 639 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 MYO1AQ9UBC5 1043 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 DNMT3LQ9UJW3 386 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 HBS1LQ9Y450 684 aaKnown RBP11.77□□□□□ -0.53
FOXN3-212ENST00000556541 PAXBP1Q9Y5B6 917 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 GOLGA8SH3BPF8 625 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 CAPN9O14815 690 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 LATS1O95835 1130 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 IGLV3-27P01718 113 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 NCAM1P13591 858 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 PDGFRAP16234 1089 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 GBP1P32455 592 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 PCK1P35558 622 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 CCR2P41597 374 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 CDR1P51861 262 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 RPL7AP62424 266 aaKnown RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 COG7P83436 770 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 DLX2Q07687 328 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 SLC5A9Q2M3M2 681 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 LEXMQ3ZCV2 418 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 C2CD6Q53TS8 623 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 TRNP1Q6NT89 227 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 GRASPQ7Z6J2 395 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 SLFN11Q7Z7L1 901 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 DDX42Q86XP3 938 aaKnown RBP eCLIP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 CCAR2Q8N163 923 aaKnown RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 C12orf76Q8N812 135 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 JOSD2Q8TAC2 188 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 DQX1Q8TE96 717 aaKnown RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 RNF139Q8WU17 664 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 RXFP2Q8WXD0 754 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 AZIN2Q96A70 460 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 ZNF830Q96NB3 372 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 MCEEQ96PE7 176 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 ATXN3LQ9H3M9 355 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 CHORDC1Q9UHD1 332 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 ANAPC7Q9UJX3 599 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 ARHGAP26Q9UNA1 814 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 USTQ9Y2C2 406 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 TLR6Q9Y2C9 796 aa11.76□□□□□ -0.53
FOXN3-212ENST00000556541 MRPS23Q9Y3D9 190 aaKnown RBP11.76□□□□□ -0.53
FOXN3-212ENST00000556541 TRAV19A0A0A6YYK7 116 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 A0A1W2PRU2 124 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 PIK3R2O00459 728 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 IRAK2O43187 625 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 ATMINO43313 823 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 COCHO43405 550 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 PROSCO94903 275 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 TRUB2O95900 331 aaKnown RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 SLC2A3P11169 496 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 MYL4P12829 197 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 FSHRP23945 695 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 PGFP49763 221 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 ZNF252P-AS1Q0IIN9 211 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 PPP2R5DQ14738 602 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 TAF5Q15542 800 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 TRIP4Q15650 581 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 CCDC14Q49A88 953 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 ARHGAP29Q52LW3 1261 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 DCAF6Q58WW2 860 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 BRMS1LQ5PSV4 323 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 OTUD1Q5VV17 481 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 DNAAF5Q86Y56 855 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 PSTKQ8IV42 348 aaKnown RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 SYCE1Q8N0S2 351 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 TPCN2Q8NHX9 752 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 NDRG1Q92597 394 aaKnown RBP11.75□□□□□ -0.53
FOXN3-212ENST00000556541 HLA-CQ95604 372 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 NTAN1Q96AB6 310 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 E2F7Q96AV8 911 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 PLD4Q96BZ4 506 aa11.75□□□□□ -0.53
FOXN3-212ENST00000556541 SLC39A13Q96H72 371 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms