RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 C1orf54Q8WWF1 131 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 DPF3Q92784 378 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 MAGOHBQ96A72 148 aaKnown RBP11.29□□□□□ -0.6
LINC01550-206ENST00000556462 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
LINC01550-206ENST00000556462 FBXO44Q9H4M3 255 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 WDR6Q9NNW5 1121 aaKnown RBP11.29□□□□□ -0.6
LINC01550-206ENST00000556462 ABCC13Q9NSE7 274 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 GPATCH2LQ9NWQ4 482 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 OSER1Q9NX31 292 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 MTMR10Q9NXD2 777 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 RRN3Q9NYV6 651 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 AFF4Q9UHB7 1163 aaKnown RBP11.29□□□□□ -0.6
LINC01550-206ENST00000556462 PATJQ8NI35 1801 aa11.29□□□□□ -0.6
LINC01550-206ENST00000556462 TJP3O95049 919 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 URODP06132 367 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 DNAJB2P25686 324 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 L1CAMP32004 1257 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CHRNA3P32297 505 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 RPL10AP62906 217 aaKnown RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 DEUP1Q05D60 604 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 NME3Q13232 169 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 MTMR3Q13615 1198 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 RAB33AQ14088 237 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 PDK2Q15119 407 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 DPYSL2Q16555 572 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CCDC70Q6NSX1 233 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 FBXO38Q6PIJ6 1188 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 MON1AQ86VX9 555 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 ATG4AQ8WYN0 398 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 ZBP1Q9H171 429 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 STIM2Q9P246 746 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 PCYOX1Q9UHG3 505 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 SYNJ2BP-COX16A0A087WUM0 186 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 ZSCAN5CA6NGD5 496 aaPredicted RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 I6L893 689 aaPredicted RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 TTI1O43156 1089 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 IGLV3-25P01717 112 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CTSAP10619 480 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 COILP38432 576 aaPredicted RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 PTGIRP43119 386 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 KCNJ1P48048 391 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 TUFMP49411 452 aaKnown RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CCNG2Q16589 344 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CCDC137Q6PK04 289 aaKnown RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 MAATS1Q7Z4T9 603 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CCDC26Q8TAB7 109 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 DQX1Q8TE96 717 aaKnown RBP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 TRIM62Q9BVG3 475 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CALN1Q9BXU9 219 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 DCLK3Q9C098 648 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 RXFP1Q9HBX9 757 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 ANLNQ9NQW6 1124 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01550-206ENST00000556462 DDIT4Q9NX09 232 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 COX16Q9P0S2 106 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 HSFX1Q9UBD0 423 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 STK39Q9UEW8 545 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
LINC01550-206ENST00000556462 CHD7Q9P2D1 2997 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 TEX28O15482 410 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 HEXIM1O94992 359 aaKnown RBP11.27□□□□□ -0.61
LINC01550-206ENST00000556462 RTN3O95197 1032 aaPredicted RBP11.27□□□□□ -0.61
LINC01550-206ENST00000556462 F9P00740 461 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 TUBBP07437 444 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 YWHAQP27348 245 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 BMPR1AP36894 532 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 FNTAP49354 379 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 BTBD8Q5XKL5 378 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 BBS12Q6ZW61 710 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 MAP7D3Q8IWC1 876 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 GIPC2Q8TF65 315 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 CEP295NLQ96MC4 621 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 RNF157Q96PX1 679 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 FAM118BQ9BPY3 351 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 COMMD8Q9NX08 183 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01550-206ENST00000556462 GMIPQ9P107 970 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 FBXW11Q9UKB1 542 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 AP4E1Q9UPM8 1137 aa11.27□□□□□ -0.61
LINC01550-206ENST00000556462 KIAA1671Q9BY89 1806 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CST8O60676 142 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ADRA1BP35368 520 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CXCR3P49682 368 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 DR1Q01658 176 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 TAF10Q12962 218 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 SNX1Q13596 522 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 DHX34Q14147 1143 aaKnown RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 TRADDQ15628 312 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms