RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ACVRL1P37023 503 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 PRIM2P49643 509 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 GPR15P49685 360 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 MMP14P50281 582 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 DGCR2P98153 550 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 AKAP17AQ02040 695 aaKnown RBP5.63□□□□□ -1.51
SRP54-211ENST00000556445 RESTQ13127 1097 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 BLMHQ13867 455 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 PDCD1Q15116 288 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 ZSCAN23Q3MJ62 389 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 SLC45A4Q5BKX6 768 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 GJC2Q5T442 439 aaPredicted RBP5.63□□□□□ -1.51
SRP54-211ENST00000556445 ITPRIPL1Q6GPH6 555 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 DARS2Q6PI48 645 aaKnown RBP5.63□□□□□ -1.51
SRP54-211ENST00000556445 SMIM5Q71RC9 77 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 C1orf210Q8IVY1 113 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 CMTM4Q8IZR5 234 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 ANKRD35Q8N283 1001 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 MIGA1Q8NAN2 632 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 SLC16A11Q8NCK7 471 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 PPP1R35Q8TAP8 253 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 GPT2Q8TD30 523 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 ADAMTS18Q8TE60 1221 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 CACTINQ8WUQ7 758 aaKnown RBP5.63□□□□□ -1.51
SRP54-211ENST00000556445 GAB3Q8WWW8 586 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 CCDC47Q96A33 483 aaKnown RBP5.63□□□□□ -1.51
SRP54-211ENST00000556445 ANO3Q9BYT9 981 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 GTPBP4Q9BZE4 634 aaKnown RBP5.63□□□□□ -1.51
SRP54-211ENST00000556445 ENKD1Q9H0I2 346 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 CXorf56Q9H5V9 222 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 LY9Q9HBG7 655 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 CD209Q9NNX6 404 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 DDX19AQ9NUU7 478 aaKnown RBP5.63□□□□□ -1.51
SRP54-211ENST00000556445 STK32BQ9NY57 414 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 CNPY2Q9Y2B0 182 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 ATP6V0A2Q9Y487 856 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 FAM205AQ6ZU69 1335 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 LRRC37AA6NMS7 1700 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 QSER1Q2KHR3 1735 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 A0A1W2PR48 441 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CTAGE5O15320 804 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 PRKAB2O43741 272 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 ALDH1A2O94788 518 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 DEXIO95424 95 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CTDNEP1O95476 244 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 YEATS4O95619 227 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CAVIN2O95810 425 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 POU2F2P09086 479 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 DHRS4L1P0CG22 281 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 XPAP23025 273 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 PRDX5P30044 214 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 KIF5BP33176 963 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 SCNN1GP51170 649 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 ICA1Q05084 483 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 DDR1Q08345 913 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 GRM1Q13255 1194 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 SPIDRQ14159 915 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 TRIM25Q14258 630 aaKnown RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 RRP1BQ14684 758 aaKnown RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 CCNG2Q16589 344 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 PITRM1Q5JRX3 1037 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 FKBP15Q5T1M5 1219 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 IGFL4Q6B9Z1 124 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 HIBCHQ6NVY1 386 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 CTR9Q6PD62 1173 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 Q6ZRM9 215 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 NEK10Q6ZWH5 1172 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CYB5R4Q7L1T6 521 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CHST3Q7LGC8 479 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 COL23A1Q86Y22 540 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 KIAA0319LQ8IZA0 1049 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 SUPT20HQ8NEM7 779 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 APPL2Q8NEU8 664 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 FBXO18Q8NFZ0 1043 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 KCNG4Q8TDN1 519 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CENPIQ92674 756 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 MIEF2Q96C03 454 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 RMDN3Q96TC7 470 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 MAP3K14Q99558 947 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CHCHD6Q9BRQ6 235 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 RNF26Q9BY78 433 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 TSPY26PQ9H489 355 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 ZNF703Q9H7S9 590 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 DMRT3Q9NQL9 472 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 CEP72Q9P209 647 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 IFT80Q9P2H3 777 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 GIMAP2Q9UG22 337 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 PRSS50Q9UI38 385 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 RCOR1Q9UKL0 485 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 TMCC3Q9ULS5 477 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 NOC2LQ9Y3T9 749 aaKnown RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 MROH7-TTC4A0A0A0MT08 1334 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 NEDD4P46934 1319 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 COL1A1P02452 1464 aaPredicted RBP5.62□□□□□ -1.51
SRP54-211ENST00000556445 LAMB1P07942 1786 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 MYH15Q9Y2K3 1946 aa5.62□□□□□ -1.51
SRP54-211ENST00000556445 GPR75-ASB3A0A0A6YYF3 556 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 A0A0G2JLW4 131 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 SMTNL1A8MU46 457 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 C19orf81C9J6K1 198 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms