RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TNFSF14O43557 240 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 HLA-EP13747 358 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 TNNI1P19237 187 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 CSNK1EP49674 416 aaKnown RBP14.73□□□□□ -0.05
ACTN1-219ENST00000556432 BNC1Q01954 994 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 DHRS13Q6UX07 377 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 HTR3DQ70Z44 454 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 SV2BQ7L1I2 683 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 TRAPPC11Q7Z392 1133 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 FAM35AQ86V20 835 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 FAM124AQ86V42 546 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 PRCCQ92733 491 aaPredicted RBP14.73□□□□□ -0.05
ACTN1-219ENST00000556432 SIPA1Q96FS4 1042 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 EPSTI1Q96J88 318 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 DUSP9Q99956 384 aaKnown RBP14.73□□□□□ -0.05
ACTN1-219ENST00000556432 MKRN2Q9H000 416 aaKnown RBP14.73□□□□□ -0.05
ACTN1-219ENST00000556432 OLFML3Q9NRN5 406 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 KRT82Q9NSB4 513 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 PLK2Q9NYY3 685 aa14.73□□□□□ -0.05
ACTN1-219ENST00000556432 NXF1Q9UBU9 619 aaKnown RBP14.73□□□□□ -0.05
ACTN1-219ENST00000556432 METTL12A8MUP2 240 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 KCNJ18B7U540 433 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 TK2O00142 265 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 KIAA0391O15091 583 aaKnown RBP14.72□□□□□ -0.05
ACTN1-219ENST00000556432 C1QL1O75973 258 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 DKK1O94907 266 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 ITPKBP27987 946 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 AFF3P51826 1226 aaKnown RBP14.72□□□□□ -0.05
ACTN1-219ENST00000556432 TRPC3Q13507 836 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 CAMK2BQ13554 666 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 TEAD4Q15561 434 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 SNX30Q5VWJ9 437 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 RRAGBQ5VZM2 374 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 LRRC69Q6ZNQ3 347 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 ZNF605Q86T29 641 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 METTL3Q86U44 580 aaKnown RBP14.72□□□□□ -0.05
ACTN1-219ENST00000556432 TMPRSS6Q8IU80 811 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 DNAJC19Q96DA6 116 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 SMARCD1Q96GM5 515 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 FGFBP2Q9BYJ0 223 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 ITM2CQ9NQX7 267 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 MARK1Q9P0L2 795 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 ZNF462Q96JM2 2506 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 SHROOM3Q8TF72 1996 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 CABIN1Q9Y6J0 2220 aa14.72□□□□□ -0.05
ACTN1-219ENST00000556432 PLK4O00444 970 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 ATXN7O15265 892 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-219ENST00000556432 AP1G2O75843 785 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 TBX18O95935 607 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 PLA2G2AP14555 144 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 TXLNAP40222 546 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 GRK6P43250 576 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 CDH8P55286 799 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 SEMG2Q02383 582 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 SMAD1Q15797 465 aaKnown RBP14.71□□□□□ -0.05
ACTN1-219ENST00000556432 KIF19Q2TAC6 998 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 INAVAQ3KP66 663 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 USP49Q70CQ1 688 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 RDH13Q8NBN7 331 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 UCMAQ8WVF2 138 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 CCDC127Q96BQ5 260 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 NXPE2Q96DL1 559 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 TLR8Q9NR97 1041 aaKnown RBP14.71□□□□□ -0.05
ACTN1-219ENST00000556432 PANK4Q9NVE7 773 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 HSPBP1Q9NZL4 362 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 FTSJ1Q9UET6 329 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 SNX11Q9Y5W9 270 aa14.71□□□□□ -0.05
ACTN1-219ENST00000556432 CST3P01034 146 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-219ENST00000556432 ZDHHC11BP0C7U3 371 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 GJB2P29033 226 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 ATP5C1P36542 298 aaKnown RBP14.7□□□□□ -0.06
ACTN1-219ENST00000556432 IL12RB1P42701 662 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 PGFP49763 221 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 CCT8P50990 548 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 IL9RQ01113 521 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 SF3A1Q15459 793 aaKnown RBP14.7□□□□□ -0.06
ACTN1-219ENST00000556432 SCARA5Q6ZMJ2 495 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 STXBP4Q6ZWJ1 553 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 ADAT2Q7Z6V5 191 aaKnown RBP14.7□□□□□ -0.06
ACTN1-219ENST00000556432 TNIP3Q96KP6 325 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 FCRL3Q96P31 734 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-219ENST00000556432 KLF16Q9BXK1 252 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-219ENST00000556432 FBXO44Q9H4M3 255 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 KIAA1586Q9HCI6 787 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 COMMD8Q9NX08 183 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 ANKRD6Q9Y2G4 727 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 AK5Q9Y6K8 562 aa14.7□□□□□ -0.06
ACTN1-219ENST00000556432 E9PAM4 449 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 KCNK3O14649 394 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 CAPN9O14815 690 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 NPC1O15118 1278 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 RRP8O43159 456 aaKnown RBP14.69□□□□□ -0.06
ACTN1-219ENST00000556432 GREM1O60565 184 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 PHACTR2O75167 634 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 FAM163BP0C2L3 166 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 CISD3P0C7P0 127 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 JUPP14923 745 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 HNF1BP35680 557 aa14.69□□□□□ -0.06
ACTN1-219ENST00000556432 ZNF132P52740 706 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms