RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ASB16Q96NS5 453 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 ASB2Q96Q27 587 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 DESI2Q9BSY9 194 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 OLA1Q9NTK5 396 aaKnown RBP14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 MARCH2Q9P0N8 246 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 ZMYM5Q9UJ78 669 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 USTQ9Y2C2 406 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 PTPRDP23468 1912 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 EIF3CLB5ME19 914 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 MSI1O43347 362 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 FLT3P36888 993 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 SCNN1AP37088 669 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 MAMLD1Q13495 774 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 ACRBPQ8NEB7 543 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 DQX1Q8TE96 717 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 KHSRPQ92945 711 aaKnown RBP eCLIP14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 SLC2A13Q96QE2 648 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 EIF3CQ99613 913 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 FAM204AQ9H8W3 233 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 LUC7LQ9NQ29 371 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 TDP1Q9NUW8 608 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 TMEM59LQ9UK28 342 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 CCL26Q9Y258 94 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 PCDHA13Q9Y5I0 950 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 ZFP37Q9Y6Q3 630 aaPredicted RBP14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 SCINQ9Y6U3 715 aa14.67□□□□□ -0.06
VIPAS39-208ENST00000556412 SLC12A8A0AV02 714 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 SIGLEC16A6NMB1 481 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 SCAMP3O14828 347 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 PDGFRAP16234 1089 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 RFC1P35251 1148 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 MATKP42679 507 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 SULT1E1P49888 294 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 GSCP56915 257 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 RPL7AP62424 266 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 PITX1P78337 314 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 PLEKHA7Q6IQ23 1121 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 PARM1Q6UWI2 310 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 TAC4Q86UU9 113 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 USP13Q92995 863 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 CFAP57Q96MR6 1250 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 ZNF830Q96NB3 372 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 KXD1Q9BQD3 176 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 MRPL47Q9HD33 250 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 GKN1Q9NS71 199 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 CTTNBP2NLQ9P2B4 639 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 STAP1Q9ULZ2 295 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 SOBPA7XYQ1 873 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 ARHGAP6O43182 974 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 OLFM2O95897 454 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 TMEM253P0C7T8 217 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 PFKLP17858 780 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 NOS2P35228 1153 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 SLC7A9P82251 487 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 ATP11AP98196 1134 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 NME3Q13232 169 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 CDO1Q16878 200 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 C10orf76Q5T2E6 689 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 TANGO2Q6ICL3 276 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 SH3RF2Q8TEC5 729 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 RXFP2Q8WXD0 754 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 NUP85Q9BW27 656 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 ZFP14Q9HCL3 533 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 DDIT4Q9NX09 232 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 CFAP97Q9P2B7 532 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 EPS15L1Q9UBC2 864 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 LIMD1Q9UGP4 676 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 TFR2Q9UP52 801 aa14.66□□□□□ -0.06
VIPAS39-208ENST00000556412 PRUNE2Q8WUY3 3088 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 TCRBV5S1A1TA0A578 114 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 M0QYT0 321 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 LCA5LO95447 670 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 TRUB2O95900 331 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 GPD1P21695 349 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 SDC4P31431 198 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 KRT83P78385 493 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 CCZ1BP86790 482 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 CCZ1P86791 482 aaPredicted RBP14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 TRNP1Q6NT89 227 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 KLHDC10Q6PID8 442 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 MTSS1LQ765P7 747 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 BEND5Q7L4P6 421 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 KIAA1328Q86T90 577 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 ADHFE1Q8IWW8 467 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 FGF14Q92915 247 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 RNF34Q969K3 372 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 SERPINB11Q96P15 392 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 SMOC2Q9H3U7 446 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 ARHGAP26Q9UNA1 814 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 NUMBLQ9Y6R0 609 aa14.65□□□□□ -0.06
VIPAS39-208ENST00000556412 LEFTY2O00292 366 aa14.64□□□□□ -0.07
VIPAS39-208ENST00000556412 CYP1A2P05177 515 aa14.64□□□□□ -0.07
VIPAS39-208ENST00000556412 TFE3P19532 575 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-208ENST00000556412 ZXDBP98169 803 aa14.64□□□□□ -0.07
VIPAS39-208ENST00000556412 C15orf59Q2T9L4 293 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-208ENST00000556412 PPP1R15BQ5SWA1 713 aa14.64□□□□□ -0.07
VIPAS39-208ENST00000556412 MSANTD2Q6P1R3 559 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms