RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CARSP49589 748 aaKnown RBP6.04□□□□□ -1.44
PRPF39-209ENST00000556353 KCNB1Q14721 858 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 ST3GAL2Q16842 350 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 MZT2AQ6P582 158 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 RANBP10Q6VN20 620 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 C11orf44Q8N8P7 122 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.04□□□□□ -1.44
PRPF39-209ENST00000556353 COQ8BQ96D53 544 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 VPS50Q96JG6 964 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 HIST1H2AAQ96QV6 131 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 DNAJB11Q9UBS4 358 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 STEAP1Q9UHE8 339 aa6.04□□□□□ -1.44
PRPF39-209ENST00000556353 KIAA0556O60303 1618 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 FRMPD2Q68DX3 1309 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-209ENST00000556353 BTF3P20290 206 aaKnown RBP6.03□□□□□ -1.44
PRPF39-209ENST00000556353 MCM5P33992 734 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 CFHR3Q02985 330 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 GRM3Q14832 879 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 TMTC4Q5T4D3 741 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 PLAG1Q6DJT9 500 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 ANO7Q6IWH7 933 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 TECPR1Q7Z6L1 1165 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 LIX1LQ8IVB5 337 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 C16orf71Q8IYS4 520 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-209ENST00000556353 METTL25Q8N6Q8 603 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 C12orf76Q8N812 135 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-209ENST00000556353 C16orf52Q8NHV5 167 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 MAP4K1Q92918 833 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 MSLNLQ96KJ4 702 aa6.03□□□□□ -1.44
PRPF39-209ENST00000556353 ZCCHC11Q5TAX3 1644 aaKnown RBP6.03□□□□□ -1.44
PRPF39-209ENST00000556353 CLIC1O00299 241 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 ADAM10O14672 748 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 ADRA1DP25100 572 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 NTSR1P30989 418 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 GBX1Q14549 363 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 KCNAB1Q14722 419 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 MFSD13AQ14CX5 517 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 GFOD2Q3B7J2 385 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 CC2D1BQ5T0F9 858 aaKnown RBP6.02□□□□□ -1.45
PRPF39-209ENST00000556353 AWAT2Q6E213 333 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 CLEC9AQ6UXN8 241 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 USP49Q70CQ1 688 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 BHLHA9Q7RTU4 235 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 SDR16C5Q8N3Y7 309 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 PNPLA1Q8N8W4 532 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 ZNF212Q9UDV6 495 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 ASAP1Q9ULH1 1129 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 G3BP2Q9UN86 482 aaKnown RBP6.02□□□□□ -1.45
PRPF39-209ENST00000556353 MAP3K4Q9Y6R4 1608 aa6.02□□□□□ -1.45
PRPF39-209ENST00000556353 UGGT2Q9NYU1 1516 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 KDM6BO15054 1643 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 ATF7P17544 494 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-209ENST00000556353 RPL17P18621 184 aaKnown RBP6.01□□□□□ -1.45
PRPF39-209ENST00000556353 RBL1P28749 1068 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 POLGP54098 1239 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-209ENST00000556353 EIF4A1P60842 406 aaKnown RBP6.01□□□□□ -1.45
PRPF39-209ENST00000556353 TXNL4AP83876 142 aaKnown RBP6.01□□□□□ -1.45
PRPF39-209ENST00000556353 ZNF91Q05481 1191 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 DEUP1Q05D60 604 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 RBMS2Q15434 407 aaKnown RBP6.01□□□□□ -1.45
PRPF39-209ENST00000556353 ZNF260Q3ZCT1 412 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 C10orf25Q5T742 122 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 EDC3Q96F86 508 aaKnown RBP6.01□□□□□ -1.45
PRPF39-209ENST00000556353 HIC2Q96JB3 615 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 SIGLEC11Q96RL6 698 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 USP29Q9HBJ7 922 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 MTMR4Q9NYA4 1195 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 CAPN11Q9UMQ6 739 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 SLC27A6Q9Y2P4 619 aa6.01□□□□□ -1.45
PRPF39-209ENST00000556353 IKBKBO14920 756 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 KCNAB3O43448 404 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 MT-ND5P03915 603 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 TMEM191BP0C7N4 346 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 HOXD9P28356 352 aaPredicted RBP6□□□□□ -1.45
PRPF39-209ENST00000556353 CLCA4Q14CN2 919 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 SEC23BQ15437 767 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 MANEALQ5VSG8 457 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 NRACQ8N912 160 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 ZDHHC12Q96GR4 267 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 SNX22Q96L94 193 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 STRBPQ96SI9 672 aaKnown RBP6□□□□□ -1.45
PRPF39-209ENST00000556353 PRDM11Q9NQV5 511 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 VPS51Q9UID3 782 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 HPSEQ9Y251 543 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 CARMIL1Q5VZK9 1371 aa6□□□□□ -1.45
PRPF39-209ENST00000556353 GLI2P10070 1586 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 UHRF1BP1LA0JNW5 1464 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.99□□□□□ -1.45
PRPF39-209ENST00000556353 MYMKA6NI61 221 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 FYB1O15117 783 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 RHCEP18577 417 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 GPC5P78333 572 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 RHDQ02161 417 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 ID2Q02363 134 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 SLC14A1Q13336 389 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 SEMA5AQ13591 1074 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 FAM71DQ8N9W8 422 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 CINPQ9BW66 212 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms