RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ZNF461Q8TAF7 563 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CSGALNACT1Q8TDX6 532 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 DEPDC1BQ8WUY9 529 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 SMARCD2Q92925 531 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 GJA10Q969M2 543 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 E2F7Q96AV8 911 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CPB2Q96IY4 423 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 SGPP1Q9BX95 441 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 C22orf23Q9BZE7 217 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 GPR88Q9GZN0 384 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 MTRRQ9UBK8 725 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 TCFL5Q9UL49 500 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 KCTD3Q9Y597 815 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 BACE2Q9Y5Z0 518 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CHD6Q8TD26 2715 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 ZMYM2Q9UBW7 1377 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ADAMTS20P59510 1910 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 DOCK5Q9H7D0 1870 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 WDR27A2RRH5 827 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 OR14I1A6ND48 311 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CASTOR2A6NHX0 329 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 PRRG1O14668 218 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 TRAPPC3O43617 180 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 NRDCO43847 1150 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 RPP40O75818 363 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 AKAP3O75969 853 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ABLIM3O94929 683 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ITGAVP06756 1048 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 THP07101 528 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 SYPP08247 313 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CEACAM1P13688 526 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CEBPBP17676 345 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ARF4P18085 180 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 YWHABP31946 246 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 VIPR2P41587 438 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CTSKP43235 329 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 KIR2DL1P43626 348 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 KIR2DL2P43627 348 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 GALK1P51570 392 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 KPNA1P52294 538 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 AKAP17AQ02040 695 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 SSRP1Q08945 709 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CCDC6Q16204 474 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 TCERG1LQ5VWI1 586 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 SLC27A1Q6PCB7 646 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 VITQ6UXI7 678 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 PDZD4Q76G19 769 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 KBTBD6Q86V97 674 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ZNF227Q86WZ6 799 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 TRIM59Q8IWR1 403 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 C4orf19Q8IY42 314 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 LEMD2Q8NC56 503 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CCDC148Q8NFR7 591 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 GAB3Q8WWW8 586 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 RELTQ969Z4 430 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ZC3H10Q96K80 434 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ZNF512Q96ME7 567 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 PAAF1Q9BRP4 392 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 NFKBIZQ9BYH8 718 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 LSG1Q9H089 658 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 SLKQ9H2G2 1235 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 NXF3Q9H4D5 531 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 PIF1Q9H611 641 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 TRPV4Q9HBA0 871 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CRTAC1Q9NQ79 661 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 RBM12Q9NTZ6 932 aaKnown RBP5.31□□□□□ -1.56
ATXN3-239ENST00000556315 ZMYM5Q9UJ78 669 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 WASF3Q9UPY6 502 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 CDY1Q9Y6F8 540 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 MYH6P13533 1939 aa5.31□□□□□ -1.56
ATXN3-239ENST00000556315 DENND4AQ7Z401 1863 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 KLF18A0A0U1RQI7 1052 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MYBPHLA2RUH7 354 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 C4orf47A7E2U8 309 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 HEPACAM2A8MVW5 462 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 TMEM189-UBE2V1I3L0A0 370 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 TAF4O00268 1085 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ARNTLO00327 626 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 CHADO15335 359 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ATG13O75143 517 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 B3GAT3O94766 335 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 RHOBTB1O94844 696 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ZNF205O95201 554 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 KCNH1O95259 989 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 NPTXRO95502 500 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 CCDC192P0DO97 292 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ATF2P15336 505 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 VAV1P15498 845 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 BMP7P18075 431 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 CSRP1P21291 193 aaKnown RBP5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ARL2P36404 184 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MPLP40238 635 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MBTD1Q05BQ5 628 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 PPP2R5CQ13362 524 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 SSPNQ14714 243 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 EMC2Q15006 297 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 EPHA7Q15375 998 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms