RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 USP29Q9HBJ7 922 aa4.04□□□□□ -1.76
SCFD1-218ENST00000556256 XPNPEP3Q9NQH7 507 aa4.04□□□□□ -1.76
SCFD1-218ENST00000556256 hCG_2014768A0A024R1R8 64 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 AKAP10O43572 662 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 SRGAP2O75044 1071 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 ATG13O75143 517 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 CDK11BP21127 795 aaKnown RBP4.03□□□□□ -1.76
SCFD1-218ENST00000556256 MLH1P40692 756 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 GAS1P54826 345 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 ZNF783Q6ZMS7 281 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 KCTD20Q7Z5Y7 419 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 TFAP2DQ7Z6R9 452 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 MPP5Q8N3R9 675 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 PNPLA1Q8N8W4 532 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 PRPF38AQ8NAV1 312 aaKnown RBP4.03□□□□□ -1.76
SCFD1-218ENST00000556256 NGDNQ8NEJ9 315 aaKnown RBP4.03□□□□□ -1.76
SCFD1-218ENST00000556256 STAG1Q8WVM7 1258 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 CGRRF1Q99675 332 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 RBM38Q9H0Z9 239 aaKnown RBP4.03□□□□□ -1.76
SCFD1-218ENST00000556256 CD93Q9NPY3 652 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 ARL8BQ9NVJ2 186 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 SEMA5BQ9P283 1151 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 STAP2Q9UGK3 403 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 STXBP5LQ9Y2K9 1186 aa4.03□□□□□ -1.76
SCFD1-218ENST00000556256 A0A0G2JK05 382 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 SERINC4A6NH21 518 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 C16orf96A6NNT2 1141 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 CD3EAPO15446 510 aaKnown RBP4.02□□□□□ -1.77
SCFD1-218ENST00000556256 LINC01565O15544 149 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 RGS10O43665 173 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 RASAL1O95294 804 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 IBSPP21815 317 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-218ENST00000556256 ENTPD1P49961 510 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 GATMP50440 423 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 IGBP1P78318 339 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 ZDHHC24Q6UX98 284 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 METTL25Q8N6Q8 603 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 FAM71DQ8N9W8 422 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 LMO3Q8TAP4 145 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 KBTBD7Q8WVZ9 684 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 PIGKQ92643 395 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 PLSCR4Q9NRQ2 329 aa4.02□□□□□ -1.77
SCFD1-218ENST00000556256 TYW1Q9NV66 732 aaKnown RBP4.02□□□□□ -1.77
SCFD1-218ENST00000556256 DNMT3BQ9UBC3 853 aaKnown RBP4.02□□□□□ -1.77
SCFD1-218ENST00000556256 NKX1-2Q9UD57 310 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-218ENST00000556256 A8MVJ9 347 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 F8W810 466 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 AGPSO00116 658 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 PRAMEF2O60811 474 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 ZNF432O94892 652 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 PAPSS2O95340 614 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-218ENST00000556256 HGFP14210 728 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 RPS6KB1P23443 525 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 SLC12A2P55011 1212 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 ANAPC15P60006 121 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 FGL2Q14314 439 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 NADSYN1Q6IA69 706 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 DPH1Q9BZG8 443 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 FZD3Q9NPG1 666 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-218ENST00000556256 ANAPC4Q9UJX5 808 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 ICAM5Q9UMF0 924 aa4.01□□□□□ -1.77
SCFD1-218ENST00000556256 SPATA31A1Q5TZJ5 1347 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 A0A088AWK7 358 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 UGDHO60701 494 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 USP12O75317 370 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 SNUPNO95149 360 aaKnown RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 IL33O95760 270 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 ACAA1P09110 424 aaPredicted RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 CD19P15391 556 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 NPR1P16066 1061 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 RHCEP18577 417 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 KRTAP10-12P60413 245 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 RAB1AP62820 205 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 EGR4Q05215 589 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 SLC13A2Q13183 592 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 FAM50AQ14320 339 aaKnown RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 CACHD1Q5VU97 1274 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 RBM44Q6ZP01 1051 aaKnown RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 CHPFQ8IZ52 775 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 C11orf44Q8N8P7 122 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 OR6B3Q8NGW1 331 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 P2RY11Q96G91 374 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 RMI1Q9H9A7 625 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 SMURF2Q9HAU4 748 aa4□□□□□ -1.77
SCFD1-218ENST00000556256 PAPOLBQ9NRJ5 636 aaKnown RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 DDX56Q9NY93 547 aaKnown RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 AGO2Q9UKV8 859 aaKnown RBP4□□□□□ -1.77
SCFD1-218ENST00000556256 ALG1L2C9J202 215 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 PPM1GO15355 546 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-218ENST00000556256 AKAP5P24588 427 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 ADRA1DP25100 572 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 PGDP52209 483 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 JAK3P52333 1124 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 EVA1CP58658 441 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 DSCR9P59020 149 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 MTA1Q13330 715 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 INSCQ1MX18 579 aa3.99□□□□□ -1.77
SCFD1-218ENST00000556256 SLC4A8Q2Y0W8 1093 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms