RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 UBXN1Q04323 297 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 MTAPQ13126 283 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 CCINQ13939 588 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 SYCP1Q15431 976 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 DGKKQ5KSL6 1271 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 RHBDF2Q6PJF5 856 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 Q6ZS52 159 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 HTR3DQ70Z44 454 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 APTXQ7Z2E3 356 aaKnown RBP15.91■□□□□ 0.14
ACTN1-217ENST00000556203 STK32AQ8WU08 396 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 RNF139Q8WU17 664 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 GOLGA1Q92805 767 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 ATOH1Q92858 354 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-217ENST00000556203 CD101Q93033 1021 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 EXOC4Q96A65 974 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 FAM122AQ96E09 287 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 PCMTD1Q96MG8 357 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-217ENST00000556203 SLC4A5Q9BY07 1137 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 STK33Q9BYT3 514 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 IRF2BPLQ9H1B7 796 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 FBRSL1Q9HCM7 1045 aaKnown RBP15.91■□□□□ 0.14
ACTN1-217ENST00000556203 OLA1Q9NTK5 396 aaKnown RBP15.91■□□□□ 0.14
ACTN1-217ENST00000556203 PCDHGC3Q9UN70 934 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 SIK3Q9Y2K2 1263 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 F5P12259 2224 aa15.91■□□□□ 0.14
ACTN1-217ENST00000556203 E5RJQ4 531 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 LAMTOR5O43504 91 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 EGFP01133 1207 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 ADH5P11766 374 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 CYP11B1P15538 503 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 KRT9P35527 623 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 POLR2FP61218 127 aaKnown RBP15.9■□□□□ 0.14
ACTN1-217ENST00000556203 PDCLQ13371 301 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 SKOR2Q2VWA4 1001 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-217ENST00000556203 GAB4Q2WGN9 574 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 LY6G5CQ5SRR4 150 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 SCUBE3Q8IX30 993 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 MAML2Q8IZL2 1156 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-217ENST00000556203 WDTC1Q8N5D0 677 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 IER2Q9BTL4 223 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 LHX5Q9H2C1 402 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 ABCC13Q9NSE7 274 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 FAM86C1Q9NVL1 165 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 SFMBT1Q9UHJ3 866 aa15.9■□□□□ 0.14
ACTN1-217ENST00000556203 HELZP42694 1942 aaKnown RBP15.9■□□□□ 0.14
ACTN1-217ENST00000556203 LTFP02788 710 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 KLKB1P03952 638 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 DRD1P21728 446 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 CORO1AP31146 461 aaKnown RBP15.89■□□□□ 0.13
ACTN1-217ENST00000556203 PLA2G5P39877 138 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 OPRD1P41143 372 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 GAD2Q05329 585 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 GAS6Q14393 721 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 IQCB1Q15051 598 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 ZSCAN23Q3MJ62 389 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 Q6ZNB5 142 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 TMEM110Q86TL2 294 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 C12orf40Q86WS4 652 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 FMNL3Q8IVF7 1028 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 SYNPOQ8N3V7 929 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 C1orf131Q8NDD1 294 aaKnown RBP15.89■□□□□ 0.13
ACTN1-217ENST00000556203 FAM149B1Q96BN6 582 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 NLRC4Q9NPP4 1024 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 SPHK2Q9NRA0 654 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 CEP83Q9Y592 693 aa15.89■□□□□ 0.13
ACTN1-217ENST00000556203 HOXC11O43248 304 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-217ENST00000556203 PAPSS1O43252 624 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-217ENST00000556203 SART1O43290 800 aaKnown RBP15.88■□□□□ 0.13
ACTN1-217ENST00000556203 GFPT2O94808 682 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 SP9P0CG40 484 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 SLC6A11P48066 632 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 ANO4Q32M45 955 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 TAF3Q5VWG9 929 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 TPGS1Q6ZTW0 290 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 TMEM25Q86YD3 366 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 NEK11Q8NG66 645 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 PLD4Q96BZ4 506 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 PPP1R13BQ96KQ4 1090 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 NOX5Q96PH1 765 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 SPAG5Q96R06 1193 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 ERGIC2Q96RQ1 377 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 CPXM1Q96SM3 734 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 PDCL3Q9H2J4 239 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 CBX8Q9HC52 389 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 PRMT8Q9NR22 394 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-217ENST00000556203 TJP2Q9UDY2 1190 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 ZNF510Q9Y2H8 683 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 DAAM1Q9Y4D1 1078 aa15.88■□□□□ 0.13
ACTN1-217ENST00000556203 MSI1O43347 362 aaKnown RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 NCAM1P13591 858 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 SOX5P35711 763 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 CCR3P51677 355 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 JAM2P57087 298 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 CSTF1Q05048 431 aaKnown RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 TRIP4Q15650 581 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 FBXO43Q4G163 708 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 MSANTD2Q6P1R3 559 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 NOP9Q86U38 636 aaKnown RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 LUZP1Q86V48 1076 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 DENND1CQ8IV53 801 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms