RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CEACAM1P13688 526 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 TYRP14679 529 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 ADORA2BP29275 332 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 SEC13P55735 322 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF445P59923 1031 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 YWHAEP62258 255 aaKnown RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 PDE4CQ08493 712 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 MESP2Q0VG99 397 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 RAB41Q5JT25 222 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 PPP1R26Q5T8A7 1209 aaPredicted RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 N4BP2L1Q5TBK1 243 aaPredicted RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 SMYD5Q6GMV2 418 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 FOXR2Q6PJQ5 311 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 SCARA5Q6ZMJ2 495 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 Q6ZNB5 142 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 CYP2U1Q7Z449 544 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 SCD5Q86SK9 330 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 ZC3H3Q8IXZ2 948 aaKnown RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 SCML4Q8N228 414 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 NAT16Q8N8M0 369 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 SPATA20Q8TB22 786 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 HEXIM2Q96MH2 286 aaKnown RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 TWNKQ96RR1 684 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 EDEM2Q9BV94 578 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 BBS2Q9BXC9 721 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 NUSAP1Q9BXS6 441 aaKnown RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC2A11Q9BYW1 496 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 TPSD1Q9BZJ3 242 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 NMUR1Q9HB89 426 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 METTL14Q9HCE5 456 aaKnown RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 CD248Q9HCU0 757 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 TMEM9BQ9NQ34 198 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 FAM49BQ9NUQ9 324 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 OSER1Q9NX31 292 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 HMGXB4Q9UGU5 601 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 HOOK1Q9UJC3 728 aaKnown RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 ANGPTL2Q9UKU9 493 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 NFE2L3Q9Y4A8 694 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 PCNX2A6NKB5 2137 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 CACNA1BQ00975 2339 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 A0A1W2PQF6 199 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 A0A1W2PQH9 124 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 LNP1A1A4G5 178 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 C4orf47A7E2U8 309 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC16A3O15427 465 aaKnown RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 STC2O76061 302 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 SMC2O95347 1197 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 PENKP01210 267 aaPredicted RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 PRR29P0C7W0 189 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 HOXB2P14652 356 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 BCKDHBP21953 392 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 DHPSP49366 369 aaPredicted RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 DGKGP49619 791 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 PGFP49763 221 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 MXI1P50539 228 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 RAD23BP54727 409 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 IRX4P78413 519 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 NUCB2P80303 420 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 LRRC63Q05C16 580 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 ENPP2Q13822 863 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 HNRNPDQ14103 355 aaKnown RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 CCDC6Q16204 474 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 DUOXA1Q1HG43 343 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 C10orf120Q5SQS8 335 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 C10orf76Q5T2E6 689 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF658Q5TYW1 1059 aaPredicted RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 PGBD3Q8N328 593 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC4A11Q8NBS3 891 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 SPRYD3Q8NCJ5 442 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 IPO4Q8TEX9 1081 aaKnown RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 UCMAQ8WVF2 138 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 PIGKQ92643 395 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 WBP2Q969T9 261 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF419Q96HQ0 510 aaPredicted RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 TSG101Q99816 390 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 CISHQ9NSE2 258 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 OLA1Q9NTK5 396 aaKnown RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 DNAJC17Q9NVM6 304 aaKnown RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 BCCIPQ9P287 314 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 NAGPAQ9UK23 515 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 PILRBQ9UKJ0 227 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 HCN2Q9UL51 889 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 STRIP2Q9ULQ0 834 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC6A14Q9UN76 642 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 MAPK8IP1Q9UQF2 711 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 HELZP42694 1942 aaKnown RBP8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 EML5Q05BV3 1969 aa8.18□□□□□ -1.1
PTCSC3-201ENST00000556013 TCRBV21S2A2A0A5A6 115 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 GOLGA6L4A6NEF3 574 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 ANTXRLA6NF34 631 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 PRRT4C9JH25 899 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 NEDD8-MDP1E9PL57 170 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 XPO1O14980 1071 aaKnown RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 P4HA2O15460 535 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 LATS1O95835 1130 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 CYBBP04839 570 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms