RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ZNF513Q8N8E2 541 aaPredicted RBP13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 SLC4A11Q8NBS3 891 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 WBP2Q969T9 261 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 HEXIM2Q96MH2 286 aaKnown RBP13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 TPSD1Q9BZJ3 242 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 NAGPAQ9UK23 515 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 FBXO10Q9UK96 956 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 SPAG17Q6Q759 2223 aa13.36□□□□□ -0.27
HNRNPC-221ENST00000555883 ANTXRLA6NF34 631 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 GFRA2O00451 464 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 STC2O76061 302 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 TYRP14679 529 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 NTSR1P30989 418 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 HOXD12P35452 270 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 CHKAP35790 457 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 YWHAEP62258 255 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 CREB5Q02930 508 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 CBWD6Q4V339 395 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 CBWD3Q5JTY5 395 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 CBWD5Q5RIA9 395 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 C10orf120Q5SQS8 335 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 C10orf76Q5T2E6 689 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 EMC10Q5UCC4 262 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 NAT16Q8N8M0 369 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 BBS2Q9BXC9 721 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 DCLK3Q9C098 648 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 RXFP3Q9NSD7 469 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 ARMCX3Q9UH62 379 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 EVLQ9UI08 416 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
HNRNPC-221ENST00000555883 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 NPC1O15118 1278 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 PENKP01210 267 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 TBXAS1P24557 533 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 ZNF132P52740 706 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 CUL2Q13617 745 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 E2F5Q15329 346 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 CCDC6Q16204 474 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 ZNF394Q53GI3 561 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 ANKRD40Q6AI12 368 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 LPCAT2Q7L5N7 544 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 CYP2U1Q7Z449 544 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 PIGZQ86VD9 579 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 SCML4Q8N228 414 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 SMARCE1Q969G3 411 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 SLC35C1Q96A29 364 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 JAKMIP2Q96AA8 810 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 EEF2KMTQ96G04 330 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 ARID3AQ99856 593 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 GABRG3Q99928 467 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 EDEM2Q9BV94 578 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 LSM14BQ9BX40 385 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 CD248Q9HCU0 757 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 BCCIPQ9P287 314 aaKnown RBP eCLIP13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 HCN2Q9UL51 889 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 KIAA1257Q9ULG3 409 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 SLC27A6Q9Y2P4 619 aa13.34□□□□□ -0.27
HNRNPC-221ENST00000555883 A0A1W2PQF6 199 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 TCRBV21S2A2A0A5A6 115 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 LNP1A1A4G5 178 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 PSMA7O14818 248 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 XPO1O14980 1071 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 ZNF217O75362 1048 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 CISD3P0C7P0 127 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 HOXB2P14652 356 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 BCKDHBP21953 392 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 DGKGP49619 791 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 PMS1P54277 932 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 BCAT1P54687 386 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 STIM1Q13586 685 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 DCAF17Q5H9S7 520 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 TCERG1LQ5VWI1 586 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 PEAR1Q5VY43 1037 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 RNF43Q68DV7 783 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 SDE2Q6IQ49 451 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 TTC30AQ86WT1 665 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 FAM217AQ8IXS0 508 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 CPXM2Q8N436 756 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 HMGB4Q8WW32 186 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 TATDN2Q93075 761 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 DHTKD1Q96HY7 919 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 CEP63Q96MT8 703 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 OLA1Q9NTK5 396 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 STRIP2Q9ULQ0 834 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 PLXND1Q9Y4D7 1925 aa13.33□□□□□ -0.28
HNRNPC-221ENST00000555883 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 ATG2BQ96BY7 2078 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 PRRT4C9JH25 899 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 P4HA2O15460 535 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 AP5Z1O43299 807 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 ZBED1O96006 694 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 KLKB1P03952 638 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 SETSIPP0DME0 302 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms