RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 RNF38Q9H0F5 515 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 SEMA4AQ9H3S1 761 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 ECT2Q9H8V3 914 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 LMAN1LQ9HAT1 526 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 RBM12Q9NTZ6 932 aaKnown RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 SCML2Q9UQR0 700 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 CPQQ9Y646 472 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 ZNF292O60281 2723 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 WDR87Q6ZQQ6 2873 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 ANAPC1Q9H1A4 1944 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 TRDMT1O14717 391 aaKnown RBP10.12□□□□□ -0.79
ACTN1-215ENST00000555616 CYP26A1O43174 497 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 NFATC1O95644 943 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 ABL1P00519 1130 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 ACO1P21399 889 aaKnown RBP10.12□□□□□ -0.79
ACTN1-215ENST00000555616 GJA4P35212 333 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 PRKCIP41743 596 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 PGFP49763 221 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 CCR3P51677 355 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 AMPD2Q01433 879 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 CSTF1Q05048 431 aaKnown RBP10.12□□□□□ -0.79
ACTN1-215ENST00000555616 PTK2Q05397 1052 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 GAS6Q14393 721 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 PON2Q15165 354 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 MEA1Q16626 185 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 ZNF394Q53GI3 561 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 HECTD3Q5T447 861 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 PPP1R26Q5T8A7 1209 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-215ENST00000555616 FSTL4Q6MZW2 842 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 ASCL5Q7RTU5 278 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 ZSCAN30Q86W11 494 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 RBBP8NLQ8NC74 664 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-215ENST00000555616 ZBTB44Q8NCP5 570 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 NKD2Q969F2 451 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-215ENST00000555616 DUSP16Q9BY84 665 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 FAM126AQ9BYI3 521 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-215ENST00000555616 CCSER2Q9H7U1 834 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 CYLDQ9NQC7 956 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 SMPD4Q9NXE4 827 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 CFAP97Q9P2B7 532 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 CNTN6Q9UQ52 1028 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 PCDHGA2Q9Y5H1 932 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 R4GN57 208 aa10.12□□□□□ -0.79
ACTN1-215ENST00000555616 E2F8A0AVK6 867 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 SLC9A3R1O14745 358 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 TLR5O60602 858 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 IPO7O95373 1038 aaKnown RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 CYP17A1P05093 508 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 PAEPP09466 180 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 PNMA6AP0CW24 399 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 MBL2P11226 248 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 SKILP12757 684 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 FECHP22830 423 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 KIF11P52732 1056 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 ZNF132P52740 706 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 GRSF1Q12849 480 aaKnown RBP eCLIP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 PPP2R5DQ14738 602 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 GAB4Q2WGN9 574 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 NAIF1Q69YI7 327 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 IRF2BP2Q7Z5L9 587 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 TTC30AQ86WT1 665 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 TTC16Q8NEE8 873 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 EXOC4Q96A65 974 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 CCDC42Q96M95 316 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 HEXIM2Q96MH2 286 aaKnown RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 P2RY13Q9BPV8 354 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 UBXN6Q9BZV1 441 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 DEF6Q9H4E7 631 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 TLR8Q9NR97 1041 aaKnown RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 ZSCAN32Q9NX65 697 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 CHORDC1Q9UHD1 332 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-215ENST00000555616 ZKSCAN5Q9Y2L8 839 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 USP3Q9Y6I4 520 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 DMDP11532 3685 aa10.11□□□□□ -0.79
ACTN1-215ENST00000555616 SSU72P8A0A1W2PR75 194 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 ESPNB1AK53 854 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 O00370 1275 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 ARHGAP6O43182 974 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 AKR1B10O60218 316 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 LILRB5O75023 590 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 CYP11B1P15538 503 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 DRD1P21728 446 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 GNA15P30679 374 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 CYLC1P35663 651 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 CXCL12P48061 93 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 PSEN1P49768 467 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 BCAT1P54687 386 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 FOXK2Q01167 660 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 SATB1Q01826 763 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 NR1H3Q13133 447 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 GOLGA7BQ2TAP0 167 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 SGO2Q562F6 1265 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 RAB41Q5JT25 222 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 E4F1Q66K89 784 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 HGSNATQ68CP4 663 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 KLHDC10Q6PID8 442 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 WDR59Q6PJI9 974 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 TSSK4Q6SA08 328 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 SCD5Q86SK9 330 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 PIGZQ86VD9 579 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms