RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PHTF2Q8N3S3 785 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 KIAA1958Q8N8K9 716 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 SCAMP5Q8TAC9 235 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 HMGB4Q8WW32 186 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 FBXO32Q969P5 355 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 SPACA7Q96KW9 195 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 MED10Q9BTT4 135 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 IL37Q9NZH6 218 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 FRMD4BQ9Y2L6 1034 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 URB1O60287 2271 aaKnown RBP11.45□□□□□ -0.58
TDP1-212ENST00000555565 KALRNO60229 2985 aa11.45□□□□□ -0.58
TDP1-212ENST00000555565 ATP8B3O60423 1300 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 A0A1W2PQ27 194 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 A0A1W2PQ64 194 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 A0A1W2PQD8 194 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 FAM92AA1XBS5 289 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 SCAMP3O14828 347 aaKnown RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 MAPK13O15264 365 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 CALUO43852 315 aaPredicted RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 AP1G2O75843 785 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 DKK1O94907 266 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 HLA-DRAP01903 254 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 PRB1P04280 392 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 P4HA1P13674 534 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 ASPAP45381 313 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 VAMP7P51809 220 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 SLC5A3P53794 718 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 ZNF33AQ06730 810 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 ORC1Q13415 861 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 DHCR24Q15392 516 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 RHBDF2Q6PJF5 856 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 KRBA2Q6ZNG9 492 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 TOGARAM2Q6ZUX3 1019 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 CRYBG2Q8N1P7 616 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 PDZD8Q8NEN9 1154 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 ZMIZ2Q8NF64 920 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 OVCA2Q8WZ82 227 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 TAF4BQ92750 862 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 SMARCD1Q96GM5 515 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 ZFRQ96KR1 1074 aaKnown RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 PNKPQ96T60 521 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 SMOQ99835 787 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 SCAND2PQ9GZW5 306 aaPredicted RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 CD248Q9HCU0 757 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 POLMQ9NP87 494 aaPredicted RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 DMAP1Q9NPF5 467 aaPredicted RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 TOR4AQ9NXH8 423 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 KIAA1522Q9P206 1035 aaPredicted RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 CFAP97Q9P2B7 532 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 CHORDC1Q9UHD1 332 aaPredicted RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
TDP1-212ENST00000555565 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
TDP1-212ENST00000555565 A0A087WV48 116 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 TCRBV21S2A2A0A5A6 115 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 SLC9A3R1O14745 358 aaPredicted RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 AP5Z1O43299 807 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 COCHO43405 550 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 BEST1O76090 585 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 ZNF202O95125 648 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 KIF20AO95235 890 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 KAT7O95251 611 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 ZDHHC11BP0C7U3 371 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 TRIM49P0CI25 452 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 TRIM49CP0CI26 452 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 MBL2P11226 248 aaPredicted RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 CCDC130P13994 396 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 GABRG2P18507 467 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 NR2F2P24468 414 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 EIF2DP41214 584 aaKnown RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 PIK3CAP42336 1068 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 TNFRSF4P43489 277 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 GCLMP48507 274 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 RPL6Q02878 288 aaKnown RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 PPP3CAQ08209 521 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 BYSLQ13895 437 aaKnown RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 NFIL3Q16649 462 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 ZCWPW2Q504Y3 356 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 EOGTQ5NDL2 527 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 SNX30Q5VWJ9 437 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 TMPRSS7Q7RTY8 843 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 UNC93AQ86WB7 457 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 MARCH9Q86YJ5 346 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 NAXDQ8IW45 347 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 C12orf29Q8N999 325 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 SLC2A14Q8TDB8 520 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 TAS1R2Q8TE23 839 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 CCDC47Q96A33 483 aaKnown RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 ZNF419Q96HQ0 510 aaPredicted RBP11.43□□□□□ -0.58
TDP1-212ENST00000555565 GDPD2Q9HCC8 539 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 CSNK1G1Q9HCP0 422 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.582e-9■■■■■ 223.6
TDP1-212ENST00000555565 KRT82Q9NSB4 513 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 FAM49BQ9NUQ9 324 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 GMIPQ9P107 970 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 BCCIPQ9P287 314 aaKnown RBP eCLIP11.43□□□□□ -0.58
TDP1-212ENST00000555565 PCOLCE2Q9UKZ9 415 aa11.43□□□□□ -0.58
TDP1-212ENST00000555565 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms