RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PYCARD-AS1I3L0S3 204 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 TLX3O43711 291 aaPredicted RBP4.37□□□□□ -1.71
SNX6-204ENST00000555541 PRAMEF2O60811 474 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 EPN2O95208 641 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 RASAL1O95294 804 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 PLA2G2AP14555 144 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 DAB2IPQ5VWQ8 1189 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 TFAP2DQ7Z6R9 452 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 P2RY11Q96G91 374 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 PRR11Q96HE9 360 aaPredicted RBP4.37□□□□□ -1.71
SNX6-204ENST00000555541 HIC2Q96JB3 615 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 C22orf23Q9BZE7 217 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 ZIM2Q9NZV7 527 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 DKK4Q9UBT3 224 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 SPATA31A1Q5TZJ5 1347 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 EME2A4GXA9 379 aaPredicted RBP4.36□□□□□ -1.71
SNX6-204ENST00000555541 PLAUP00749 431 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 TACR3P29371 465 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 CPA2P48052 419 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 PTDSS1P48651 473 aaKnown RBP4.36□□□□□ -1.71
SNX6-204ENST00000555541 PGDP52209 483 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 RHDQ02161 417 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 FAM110CQ1W6H9 321 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 DGKKQ5KSL6 1271 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 CACHD1Q5VU97 1274 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 LVRNQ6Q4G3 990 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 MAEAQ7L5Y9 396 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 ADHFE1Q8IWW8 467 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 RUNDC1Q96C34 613 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 NMD3Q96D46 503 aaKnown RBP4.36□□□□□ -1.71
SNX6-204ENST00000555541 TRMT61AQ96FX7 289 aaKnown RBP4.36□□□□□ -1.71
SNX6-204ENST00000555541 THOC3Q96J01 351 aaKnown RBP4.36□□□□□ -1.71
SNX6-204ENST00000555541 B3GNT5Q9BYG0 378 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 DHX36Q9H2U1 1008 aaKnown RBP4.36□□□□□ -1.71
SNX6-204ENST00000555541 VPS45Q9NRW7 570 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 CPNE7Q9UBL6 633 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 NKX1-2Q9UD57 310 aaPredicted RBP4.36□□□□□ -1.71
SNX6-204ENST00000555541 VPS51Q9UID3 782 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 EVPLQ92817 2033 aa4.36□□□□□ -1.71
SNX6-204ENST00000555541 A0A0G2JK05 382 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 RGS10O43665 173 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 MYBP10242 640 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 ADRA1DP25100 572 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 HOXA7P31268 230 aaPredicted RBP4.35□□□□□ -1.71
SNX6-204ENST00000555541 SUMO3P55854 103 aaPredicted RBP4.35□□□□□ -1.71
SNX6-204ENST00000555541 ZNF585BQ52M93 769 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 CC2D1BQ5T0F9 858 aaKnown RBP4.35□□□□□ -1.71
SNX6-204ENST00000555541 GRHL2Q6ISB3 625 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 C11orf44Q8N8P7 122 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 BCAS4Q8TDM0 211 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 SLC25A28Q96A46 364 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 ZNF479Q96JC4 524 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 SCNM1Q9BWG6 230 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 SLCO5A1Q9H2Y9 848 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 THRAP3Q9Y2W1 955 aaKnown RBP4.35□□□□□ -1.71
SNX6-204ENST00000555541 PAXBP1Q9Y5B6 917 aa4.35□□□□□ -1.71
SNX6-204ENST00000555541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.34□□□□□ -1.71
SNX6-204ENST00000555541 INPPL1O15357 1258 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 ATG13O75143 517 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 IL1R1P14778 569 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 SLC7A1P30825 629 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 NTSR1P30989 418 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 COPAP53621 1224 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 ITGA8P53708 1063 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 ARHGEF7Q14155 803 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 KPNB1Q14974 876 aaKnown RBP4.34□□□□□ -1.71
SNX6-204ENST00000555541 PFKFB3Q16875 520 aaPredicted RBP4.34□□□□□ -1.71
SNX6-204ENST00000555541 ODF3L2Q3SX64 289 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 CXorf57Q6NSI4 855 aaKnown RBP4.34□□□□□ -1.71
SNX6-204ENST00000555541 KIAA0319LQ8IZA0 1049 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 DCP1BQ8IZD4 617 aaKnown RBP4.34□□□□□ -1.71
SNX6-204ENST00000555541 ASB5Q8WWX0 329 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 ZPBPQ9BS86 351 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 NUAK2Q9H093 628 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 TMEM60Q9H2L4 133 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 TMEM45AQ9NWC5 275 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 PCDHA12Q9UN75 941 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 ICKQ9UPZ9 632 aa4.34□□□□□ -1.71
SNX6-204ENST00000555541 SIRT4Q9Y6E7 314 aaPredicted RBP4.34□□□□□ -1.71
SNX6-204ENST00000555541 TRBV5-3A0A0A0MS03 114 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 CAPN8A6NHC0 703 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 FOXN3O00409 490 aaPredicted RBP4.33□□□□□ -1.72
SNX6-204ENST00000555541 CA12O43570 354 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 CTNND1O60716 968 aaKnown RBP4.33□□□□□ -1.72
SNX6-204ENST00000555541 PIAS2O75928 621 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 HOXB2P14652 356 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 KLRC1P26715 233 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 ARRB2P32121 409 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 HTR7P34969 479 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 IDUAP35475 653 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 MTHFSP49914 203 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 ZXDBP98169 803 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 MTAPQ13126 283 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 DNASE1L3Q13609 305 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 MANEAQ5SRI9 462 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 ODR4Q5SWX8 454 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 RAVER1Q8IY67 606 aaKnown RBP4.33□□□□□ -1.72
SNX6-204ENST00000555541 C16orf71Q8IYS4 520 aaPredicted RBP4.33□□□□□ -1.72
SNX6-204ENST00000555541 SUCLG2Q96I99 432 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 FCRL5Q96RD9 977 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms