RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KRT15P19012 456 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 MATKP42679 507 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 RASA2Q15283 850 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 CCDC121Q6ZUS5 278 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 PALM2Q8IXS6 379 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 C4orf33Q8N1A6 199 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 CSPG4P5Q96PW8 444 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 DHRS4Q9BTZ2 278 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 ACSS3Q9H6R3 686 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 ETNK2Q9NVF9 386 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 NKIRAS1Q9NYS0 192 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 PAK5Q9P286 719 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 FAM47DPA6NHR8 397 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 FAM155AB1AL88 458 aaPredicted RBP25.22■■□□□ 1.63
TMEM260-207ENST00000555497 MDH1BQ5I0G3 518 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 EFHC1Q5JVL4 640 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 ARHGEF18Q6ZSZ5 1173 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 FAM131BQ86XD5 332 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 CCDC110Q8TBZ0 833 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 DENND1AQ8TEH3 1009 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 CCT6BQ92526 530 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 FAM149B1Q96BN6 582 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 SENP8Q96LD8 212 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 SENP6Q9GZR1 1112 aaPredicted RBP25.22■■□□□ 1.63
TMEM260-207ENST00000555497 CRTAC1Q9NQ79 661 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 TMPRSS4Q9NRS4 437 aa25.22■■□□□ 1.63
TMEM260-207ENST00000555497 PSMC3IPQ9P2W1 217 aaPredicted RBP25.22■■□□□ 1.63
TMEM260-207ENST00000555497 M0QZ92 97 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 CHADO15335 359 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 NPR3P17342 541 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 FOXN2P32314 431 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 STX2P32856 288 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 PHBP35232 272 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 TRIM32Q13049 653 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 CLEC20AQ6ZU45 233 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 STRADAQ7RTN6 431 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 C3orf58Q8NDZ4 430 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 TIMM13Q9Y5L4 95 aaPredicted RBP25.21■■□□□ 1.63
TMEM260-207ENST00000555497 TEX264Q9Y6I9 313 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 DNM1LO00429 736 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 KPNA6O60684 536 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 AMPD1P23109 780 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 AGO3Q9H9G7 860 aaKnown RBP25.21■■□□□ 1.63
TMEM260-207ENST00000555497 SAMD15Q9P1V8 674 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 USP3Q9Y6I4 520 aa25.21■■□□□ 1.63
TMEM260-207ENST00000555497 CFAP69A5D8W1 941 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 SNX3O60493 162 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 FSBPO95073 299 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 OAS1P00973 400 aaKnown RBP25.2■■□□□ 1.62
TMEM260-207ENST00000555497 GOT1P17174 413 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 SULT1E1P49888 294 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 CLCNKBP51801 687 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 INHBEP58166 350 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 MRPS5P82675 430 aaKnown RBP25.2■■□□□ 1.62
TMEM260-207ENST00000555497 SLC25A52Q3SY17 297 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 NUGGCQ68CJ6 796 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 PAFAH2Q99487 392 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 PPCSQ9HAB8 311 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 DDX43Q9NXZ2 648 aaKnown RBP25.2■■□□□ 1.62
TMEM260-207ENST00000555497 FZD10Q9ULW2 581 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 CPP00450 1065 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 DCAF6Q58WW2 860 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 ADGRD1Q6QNK2 874 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 PPP1R21Q6ZMI0 780 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 HFE2Q6ZVN8 426 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 DCAKDQ8WVC6 231 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 TGS1Q96RS0 853 aaKnown RBP25.2■■□□□ 1.62
TMEM260-207ENST00000555497 PAAF1Q9BRP4 392 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 DNAI2Q9GZS0 605 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 NSRP1Q9H0G5 558 aaKnown RBP25.2■■□□□ 1.62
TMEM260-207ENST00000555497 ETNK1Q9HBU6 452 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 FETUBQ9UGM5 382 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 NR2E3Q9Y5X4 410 aa25.2■■□□□ 1.62
TMEM260-207ENST00000555497 PRPF4O43172 522 aaKnown RBP eCLIP25.19■■□□□ 1.62
TMEM260-207ENST00000555497 MAP3K7CLP57077 242 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 ITIH4Q14624 930 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 SYPL2Q5VXT5 272 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 NCBP2-AS2Q69YL0 99 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 AGMOQ6ZNB7 445 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 SERINC5Q86VE9 423 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 MAGEB18Q96M61 343 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 MED10Q9BTT4 135 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 TMEM30AQ9NV96 361 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 GRID1Q9ULK0 1009 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 CAPN7Q9Y6W3 813 aa25.19■■□□□ 1.62
TMEM260-207ENST00000555497 GOLGA6L7A0A1B0GV03 622 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 KBTBD13C9JR72 458 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 DAB1O75553 588 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 ASMTLO95671 621 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 TAC1P20366 129 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 RPA3P35244 121 aaPredicted RBP25.18■■□□□ 1.62
TMEM260-207ENST00000555497 YWHAZP63104 245 aaKnown RBP25.18■■□□□ 1.62
TMEM260-207ENST00000555497 MGAT3Q09327 533 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 ZKSCAN8Q15776 578 aaPredicted RBP25.18■■□□□ 1.62
TMEM260-207ENST00000555497 SLC45A4Q5BKX6 768 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 KCNT2Q6UVM3 1135 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 MZB1Q8WU39 189 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 KCTD13Q8WZ19 329 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 UPF3AQ9H1J1 476 aaKnown RBP25.18■■□□□ 1.62
TMEM260-207ENST00000555497 CEP350Q5VT06 3117 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms