RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DEFB107AQ8IZN7 70 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PYROXD2Q8N2H3 581 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 SNX31Q8N9S9 440 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 WRNIP1Q96S55 665 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 CXCL16Q9H2A7 254 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 DHX35Q9H5Z1 703 aaKnown RBP17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 MINDY3Q9H8M7 445 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 PDLIM7Q9NR12 457 aa17.68■□□□□ 0.42
PPP4R3A-208ENST00000555462 TCRBV5S1A1TA0A578 114 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 ADCY6O43306 1168 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 RFPL1O75677 317 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 MLH1P40692 756 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 ASPAP45381 313 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 DSG1Q02413 1049 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 CXCL9Q07325 125 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 N4BP2L1Q5TBK1 243 aaPredicted RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 TTC39BQ5VTQ0 682 aaPredicted RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 PCGF5Q86SE9 256 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 SATL1Q86VE3 508 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 CAND1Q86VP6 1230 aaKnown RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 COPS5Q92905 334 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 ECSITQ9BQ95 431 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 FOXP3Q9BZS1 431 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 ELOVL4Q9GZR5 314 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 DDX18Q9NVP1 670 aaKnown RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 BTBD7Q9P203 1132 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 ADAMTS6Q9UKP5 1117 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 BPTFQ12830 3046 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 AIM2O14862 343 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 TRPA1O75762 1119 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 TRUB2O95900 331 aaKnown RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 LMNAP02545 664 aaKnown RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 PGK2P07205 417 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 SERPINB5P36952 375 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 MAP1SQ66K74 1059 aaPredicted RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 TMPRSS6Q8IU80 811 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 TP53INP2Q8IXH6 220 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 GALNT4Q8N4A0 578 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 USP13Q92995 863 aaPredicted RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 UBE2OQ9C0C9 1292 aaKnown RBP17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 TLE6Q9H808 572 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 PLAC1Q9HBJ0 212 aa17.67■□□□□ 0.42
PPP4R3A-208ENST00000555462 HMX2A2RU54 273 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 APOC4-APOC2K7ER74 178 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 PEX1O43933 1283 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 APOC2P02655 101 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 AMHP03971 560 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 PRKCBP05771 671 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 CALRP27797 417 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 SNRPFP62306 86 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 DLG2Q15700 870 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 ZNF667Q5HYK9 610 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 CEP128Q6ZU80 1094 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 ADGRF2Q8IZF7 708 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 MRIQ9BWK5 157 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 XAB2Q9HCS7 855 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 APPL1Q9UKG1 709 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 ANKRD12Q6UB98 2062 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 CAPN8A6NHC0 703 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 AHCYL1O43865 530 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 ERVK-10P10266 1014 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 ITGA9Q13797 1035 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 IYDQ6PHW0 289 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 FAM156AQ8NDB6 213 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 LGMNQ99538 433 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 CAB39LQ9H9S4 337 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 CITO14578 2027 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 MAGEA13PA6NCF6 341 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 POLR2BP30876 1174 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 PKNOX1P55347 436 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 HIC1Q14526 733 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 CCDC142Q17RM4 750 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 PNPLA1Q8N8W4 532 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 STKLD1Q8NE28 680 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 ZNF778Q96MU6 729 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 ETNK2Q9NVF9 386 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 TAGLN3Q9UI15 199 aa17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 HBS1LQ9Y450 684 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-208ENST00000555462 NPTXRO95502 500 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 TCF7P36402 384 aaPredicted RBP17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 STAT5BP51692 787 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 AP2B1P63010 937 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 ZRSR2Q15696 482 aaKnown RBP17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 SLFN12LQ6IEE8 588 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 C10orf107Q8IVU9 208 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 SPATA6LQ8N4H0 392 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 PLD5Q8N7P1 536 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 INPP5FQ9Y2H2 1132 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 LIN7AO14910 233 aaPredicted RBP17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 ARRB2P32121 409 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 OCRLQ01968 901 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 LAMB3Q13751 1172 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 CNPY1Q3B7I2 92 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 GLRA4Q5JXX5 417 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 DRICH1Q6PGQ1 229 aaPredicted RBP17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 FAM183BPQ6ZVS7 135 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 NIPA1Q7RTP0 329 aa17.65■□□□□ 0.42
PPP4R3A-208ENST00000555462 CCNYQ8ND76 341 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms