RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PGDP52209 483 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 ALDH18A1P54886 795 aaKnown RBP6.19□□□□□ -1.42
VRK1-205ENST00000555402 RALBP1Q15311 655 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 TAF12Q16514 161 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 DEPDC1Q5TB30 811 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 ANKRD45Q5TZF3 282 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 MMS22LQ6ZRQ5 1243 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 FAM136AQ96C01 138 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 EID2BQ96D98 161 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 HELLSQ9NRZ9 838 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 INTS13Q9NVM9 706 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 SSX2IPQ9Y2D8 614 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 HMX3A6NHT5 357 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 DNPH1O43598 174 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 GYS1P13807 737 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 NTSR1P30989 418 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 SLC5A2P31639 672 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 MTHFSP49914 203 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 VAV2P52735 878 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 SRSF7Q16629 238 aaKnown RBP eCLIP6.18□□□□□ -1.42
VRK1-205ENST00000555402 LIN54Q6MZP7 749 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 TTC30AQ86WT1 665 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 SUGP1Q8IWZ8 645 aaKnown RBP6.18□□□□□ -1.42
VRK1-205ENST00000555402 LNX2Q8N448 690 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 ABHD5Q8WTS1 349 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 OSCP1Q8WVF1 389 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 OSBPL9Q96SU4 736 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 ACTRT3Q9BYD9 372 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 KRTAP2-2Q9BYT5 123 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 UNKLQ9H9P5 680 aaKnown RBP6.18□□□□□ -1.42
VRK1-205ENST00000555402 DTNAQ9Y4J8 743 aa6.18□□□□□ -1.42
VRK1-205ENST00000555402 MANSC4A6NHS7 340 aaPredicted RBP6.17□□□□□ -1.42
VRK1-205ENST00000555402 ACTL6BO94805 426 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 ONECUT2O95948 504 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 CSF1RP07333 972 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 ARP10275 920 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 CD53P19397 219 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 EPHA3P29320 983 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 AKT1P31749 480 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 UQCRC1P31930 480 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 RGS19P49795 217 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 GATMP50440 423 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 BCAT1P54687 386 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 AP2B1P63010 937 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 ATP1A4Q13733 1029 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 EZH2Q15910 746 aaKnown RBP6.17□□□□□ -1.42
VRK1-205ENST00000555402 ATPAF1Q5TC12 328 aaPredicted RBP6.17□□□□□ -1.42
VRK1-205ENST00000555402 TANGO2Q6ICL3 276 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 RINT1Q6NUQ1 792 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 CLEC9AQ6UXN8 241 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 FSTL5Q8N475 847 aaPredicted RBP6.17□□□□□ -1.42
VRK1-205ENST00000555402 B3GALNT2Q8NCR0 500 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 STT3BQ8TCJ2 826 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 OTUD7AQ8TE49 926 aaPredicted RBP6.17□□□□□ -1.42
VRK1-205ENST00000555402 HASPINQ8TF76 798 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 AMBRA1Q9C0C7 1298 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 CPNE5Q9HCH3 593 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 SAYSD1Q9NPB0 183 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 KIF17Q9P2E2 1029 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 ANAPC4Q9UJX5 808 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 USP22Q9UPT9 525 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 LZTS1Q9Y250 596 aa6.17□□□□□ -1.42
VRK1-205ENST00000555402 PNMA6EA0A0J9YXQ4 647 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 J3KTA2 159 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 EIF3FO00303 357 aaPredicted RBP6.16□□□□□ -1.42
VRK1-205ENST00000555402 PPM1DO15297 605 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 NTSR2O95665 410 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 WT1P19544 449 aaPredicted RBP6.16□□□□□ -1.42
VRK1-205ENST00000555402 TRIM71Q2Q1W2 868 aaKnown RBP6.16□□□□□ -1.42
VRK1-205ENST00000555402 ADCK5Q3MIX3 580 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 ABLIM2Q6H8Q1 611 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 CYP26C1Q6V0L0 522 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 NRSN1Q8IZ57 195 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 ABRAQ8N0Z2 381 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 SLC30A5Q8TAD4 765 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 ATG4AQ8WYN0 398 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 SARAFQ96BY9 339 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 UBXN10Q96LJ8 280 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 C17orf80Q9BSJ5 609 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 RTKNQ9BST9 563 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 MLXIPQ9HAP2 919 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 SEPSECSQ9HD40 501 aaKnown RBP6.16□□□□□ -1.42
VRK1-205ENST00000555402 SRP68Q9UHB9 627 aaKnown RBP6.16□□□□□ -1.42
VRK1-205ENST00000555402 ENTPD2Q9Y5L3 495 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 SNX14Q9Y5W7 946 aa6.16□□□□□ -1.42
VRK1-205ENST00000555402 LRRFIP2Q9Y608 721 aaKnown RBP6.16□□□□□ -1.42
VRK1-205ENST00000555402 PCDH17O14917 1159 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 PEX1O43933 1283 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 AGR2O95994 175 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 PYGLP06737 847 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 ANXA6P08133 673 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 PDHA1P08559 390 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 PPP3CBP16298 524 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 GPD1P21695 349 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 EIF2B5Q13144 721 aaKnown RBP6.15□□□□□ -1.42
VRK1-205ENST00000555402 P3H1Q32P28 736 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 MOGAT3Q86VF5 341 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 IZUMO1Q8IYV9 350 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 FAM109AQ8N4B1 249 aa6.15□□□□□ -1.42
VRK1-205ENST00000555402 C11orf44Q8N8P7 122 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms