RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 FRMD8P1Q9BZ68 369 aaPredicted RBP24.66■■□□□ 1.54
STRN3-207ENST00000555358 DENND2DQ9H6A0 471 aaPredicted RBP24.66■■□□□ 1.54
STRN3-207ENST00000555358 ZWILCHQ9H900 591 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 PDCD11Q14690 1871 aaKnown RBP24.65■■□□□ 1.54
STRN3-207ENST00000555358 PSMA2P25787 234 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 MAP3K21Q5TCX8 1036 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 SH3TC2Q8TF17 1288 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 MIPEPQ99797 713 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 VPS11Q9H270 941 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 PLEKHA5Q9HAU0 1116 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 KLK14Q9P0G3 267 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 ITGA11Q9UKX5 1188 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 RPL26L1Q9UNX3 145 aaKnown RBP24.65■■□□□ 1.54
STRN3-207ENST00000555358 PPEF2O14830 753 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 TROVE2P10155 538 aaKnown RBP eCLIP24.65■■□□□ 1.54
STRN3-207ENST00000555358 RAD23BP54727 409 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 KCNT1Q5JUK3 1230 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 NT5DC4Q86YG4 428 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 JOSD2Q8TAC2 188 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 TTC8Q8TAM2 541 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 RAET1EQ8TD07 263 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 PTPRN2Q92932 1015 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 C18orf25Q96B23 403 aaPredicted RBP24.65■■□□□ 1.54
STRN3-207ENST00000555358 TUBGCP4Q9UGJ1 667 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 HMGXB4Q9UGU5 601 aa24.65■■□□□ 1.54
STRN3-207ENST00000555358 GOLGA8RI6L899 631 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 SKAP2O75563 359 aaPredicted RBP24.64■■□□□ 1.54
STRN3-207ENST00000555358 KDELR1P24390 212 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 HOXD10P28358 340 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 OVGP1Q12889 678 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 PTPN20Q4JDL3 420 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 ALKAL1Q6UXT8 129 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 SERINC5Q86VE9 423 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 TTC13Q8NBP0 860 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 ALKBH8Q96BT7 664 aaKnown RBP24.64■■□□□ 1.54
STRN3-207ENST00000555358 KLF6Q99612 283 aaPredicted RBP24.64■■□□□ 1.54
STRN3-207ENST00000555358 VRTNQ9H8Y1 702 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 TJP2Q9UDY2 1190 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 DCTN4Q9UJW0 460 aa24.64■■□□□ 1.54
STRN3-207ENST00000555358 LUC7L3O95232 432 aaKnown RBP24.63■■□□□ 1.53
STRN3-207ENST00000555358 CHRNA1P02708 482 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 ATICP31939 592 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 RBP5P82980 135 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 DENND1BQ6P3S1 775 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 UNC45BQ8IWX7 931 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 TWNKQ96RR1 684 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 MANSC1Q9H8J5 431 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 SIGLEC16A6NMB1 481 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 HNRNPCL1O60812 293 aaKnown RBP24.63■■□□□ 1.53
STRN3-207ENST00000555358 ENTPD5O75356 428 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 KRT7P08729 469 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 CD48P09326 243 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 PSEN1P49768 467 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 MTM1Q13496 603 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 ZBTB6Q15916 424 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 SEPT7Q16181 437 aaKnown RBP24.63■■□□□ 1.53
STRN3-207ENST00000555358 TAB3Q8N5C8 712 aaPredicted RBP24.63■■□□□ 1.53
STRN3-207ENST00000555358 RSAD2Q8WXG1 361 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 CYTH4Q9UIA0 394 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 STRIP2Q9ULQ0 834 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 TRPV2Q9Y5S1 764 aa24.63■■□□□ 1.53
STRN3-207ENST00000555358 CST5P28325 142 aaPredicted RBP24.62■■□□□ 1.53
STRN3-207ENST00000555358 BBS9Q3SYG4 887 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 PALM2Q8IXS6 379 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 ZNF784Q8NCA9 323 aaPredicted RBP24.62■■□□□ 1.53
STRN3-207ENST00000555358 SMG8Q8ND04 991 aaKnown RBP24.62■■□□□ 1.53
STRN3-207ENST00000555358 CNTN3Q9P232 1028 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 IPPQ9Y573 584 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 M0QZ92 97 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 DHRS4L1P0CG22 281 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 KRT3P12035 628 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 TSHRP16473 764 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 TWF2Q6IBS0 349 aaKnown RBP24.62■■□□□ 1.53
STRN3-207ENST00000555358 FNIP1Q8TF40 1166 aa24.62■■□□□ 1.53
STRN3-207ENST00000555358 XPO7Q9UIA9 1087 aaKnown RBP24.62■■□□□ 1.53
STRN3-207ENST00000555358 CORO1CQ9ULV4 474 aaPredicted RBP24.62■■□□□ 1.53
STRN3-207ENST00000555358 CMPK2Q5EBM0 449 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 IGDCC3Q8IVU1 814 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.61■■□□□ 1.53
STRN3-207ENST00000555358 ARRDC4Q8NCT1 418 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 PTCD3Q96EY7 689 aaKnown RBP24.61■■□□□ 1.53
STRN3-207ENST00000555358 FAM167BQ9BTA0 163 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 CADM1Q9BY67 442 aaKnown RBP24.61■■□□□ 1.53
STRN3-207ENST00000555358 SENP6Q9GZR1 1112 aaPredicted RBP24.61■■□□□ 1.53
STRN3-207ENST00000555358 NEBLO76041 1014 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 ETV4P43268 484 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 NEK3P51956 506 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 YWHAEP62258 255 aaKnown RBP24.61■■□□□ 1.53
STRN3-207ENST00000555358 LRRC6Q86X45 466 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 PDIK1LQ8N165 341 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 SPDL1Q96EA4 605 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 ELOVL4Q9GZR5 314 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 KCNK13Q9HB14 408 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 ST3GAL5Q9UNP4 418 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 DERAQ9Y315 318 aa24.61■■□□□ 1.53
STRN3-207ENST00000555358 SMAPO00193 183 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 CD19P15391 556 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 HADHQ16836 314 aaKnown RBP24.6■■□□□ 1.53
STRN3-207ENST00000555358 RFWD3Q6PCD5 774 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 C4orf50Q6ZRC1 276 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms