RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 RNASE9P60153 205 aaKnown RBP14.93□□□□□ -0.02
CHD8-208ENST00000555301 GPC5P78333 572 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 CCDC173Q0VFZ6 552 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 DCAF6Q58WW2 860 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 FAM78AQ5JUQ0 283 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 PLEKHA7Q6IQ23 1121 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 MSANTD2Q6P1R3 559 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 POTEHQ6S545 545 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 PHLDB2Q86SQ0 1253 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 DDX42Q86XP3 938 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHD8-208ENST00000555301 CTNNBL1Q8WYA6 563 aaPredicted RBP14.93□□□□□ -0.02
CHD8-208ENST00000555301 NXPE3Q969Y0 559 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 SLC22A12Q96S37 553 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 THAP2Q9H0W7 228 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 ZFP14Q9HCL3 533 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 METTL5Q9NRN9 209 aaKnown RBP14.93□□□□□ -0.02
CHD8-208ENST00000555301 TMEM51Q9NW97 253 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 OBP2AQ9NY56 170 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHD8-208ENST00000555301 RASAL2Q9UJF2 1139 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 TMEM59LQ9UK28 342 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 NUDT5Q9UKK9 219 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 INTUQ9ULD6 942 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 STAP1Q9ULZ2 295 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 NAALADL1Q9UQQ1 740 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 CPQQ9Y646 472 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 PATJQ8NI35 1801 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 TCRBV5S1A1TA0A578 114 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 LOC730098B7Z3J9 87 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 ARHGAP6O43182 974 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 TMEM253P0C7T8 217 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 BMP1P13497 986 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 TCF3P15923 654 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 MAGEA1P43355 309 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 KPNA1P52294 538 aaPredicted RBP14.92□□□□□ -0.02
CHD8-208ENST00000555301 COG7P83436 770 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 EFEMP1Q12805 493 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 MAMLD1Q13495 774 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 PPP1R15BQ5SWA1 713 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 SYPL2Q5VXT5 272 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 DCUN1D2Q6PH85 259 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 RAD9BQ6WBX8 426 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 DNAAF5Q86Y56 855 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 CELF5Q8N6W0 485 aaKnown RBP14.92□□□□□ -0.02
CHD8-208ENST00000555301 DQX1Q8TE96 717 aaKnown RBP14.92□□□□□ -0.02
CHD8-208ENST00000555301 USP13Q92995 863 aaPredicted RBP14.92□□□□□ -0.02
CHD8-208ENST00000555301 ELSPBP1Q96BH3 223 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 SERPINB11Q96P15 392 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 DDX23Q9BUQ8 820 aaKnown RBP14.92□□□□□ -0.02
CHD8-208ENST00000555301 SMOC2Q9H3U7 446 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 MARCH2Q9P0N8 246 aa14.92□□□□□ -0.02
CHD8-208ENST00000555301 ANHXE9PGG2 379 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 ZNF263O14978 683 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 ATMINO43313 823 aaPredicted RBP14.91□□□□□ -0.02
CHD8-208ENST00000555301 ECI2O75521 394 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 PRAMEF12O95522 483 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 CYP1A2P05177 515 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 DESP17661 470 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 FLT3P36888 993 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 KRT83P78385 493 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 ZP2Q05996 745 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 NNTQ13423 1086 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 SLC25A52Q3SY17 297 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHD8-208ENST00000555301 TXLNBQ8N3L3 684 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 MCEEQ96PE7 176 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 KLF16Q9BXK1 252 aaPredicted RBP14.91□□□□□ -0.02
CHD8-208ENST00000555301 SMG9Q9H0W8 520 aaKnown RBP14.91□□□□□ -0.02
CHD8-208ENST00000555301 SMPD4Q9NXE4 827 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 IGSF9Q9P2J2 1179 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 MYO1AQ9UBC5 1043 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 SFMBT1Q9UHJ3 866 aa14.91□□□□□ -0.02
CHD8-208ENST00000555301 HBS1LQ9Y450 684 aaKnown RBP14.91□□□□□ -0.02
CHD8-208ENST00000555301 SLC12A8A0AV02 714 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 C2CD4BA6NLJ0 364 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 MDM4O15151 490 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 TRUB2O95900 331 aaKnown RBP14.9□□□□□ -0.02
CHD8-208ENST00000555301 PDGFRAP16234 1089 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 GPD1P21695 349 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 FCARP24071 287 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 SDC4P31431 198 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 GBP1P32455 592 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 RFC1P35251 1148 aaPredicted RBP14.9□□□□□ -0.02
CHD8-208ENST00000555301 VIPR2P41587 438 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 HTR4Q13639 388 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 MTF1Q14872 753 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 TJAP1Q5JTD0 557 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 TANGO2Q6ICL3 276 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 PARM1Q6UWI2 310 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 TAC4Q86UU9 113 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 EMC1Q8N766 993 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 KIAA1958Q8N8K9 716 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 JOSD2Q8TAC2 188 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 BPIFB1Q8TDL5 484 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 SH3RF2Q8TEC5 729 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 DEPDC1BQ8WUY9 529 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 RXFP2Q8WXD0 754 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 FGF14Q92915 247 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 NT5C3BQ969T7 300 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms