RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 CCHCR1Q8TD31 782 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 DENND1AQ8TEH3 1009 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 KBTBD7Q8WVZ9 684 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 GAB3Q8WWW8 586 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 HSPH1Q92598 858 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 PGAP3Q96FM1 320 aaPredicted RBP4.12□□□□□ -1.75
KTN1-220ENST00000555172 CNDP1Q96KN2 507 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 SNX27Q96L92 541 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 BDH2Q9BUT1 245 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 THUMPD3Q9BV44 507 aaKnown RBP4.12□□□□□ -1.75
KTN1-220ENST00000555172 PHF7Q9BWX1 381 aaPredicted RBP4.12□□□□□ -1.75
KTN1-220ENST00000555172 RANBP17Q9H2T7 1088 aaKnown RBP4.12□□□□□ -1.75
KTN1-220ENST00000555172 NELFAQ9H3P2 528 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 MUC13Q9H3R2 512 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 NOD2Q9HC29 1040 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 SLAMF7Q9NQ25 335 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 G6PC2Q9NQR9 355 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 PAPOLBQ9NRJ5 636 aaKnown RBP4.12□□□□□ -1.75
KTN1-220ENST00000555172 INTS10Q9NVR2 710 aaKnown RBP4.12□□□□□ -1.75
KTN1-220ENST00000555172 HSPBP1Q9NZL4 362 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 PI4KBQ9UBF8 816 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 DTNAQ9Y4J8 743 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 AP1M2Q9Y6Q5 423 aa4.12□□□□□ -1.75
KTN1-220ENST00000555172 OR14I1A6ND48 311 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 A8MXE2 369 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 K7EPI3 171 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 NDC80O14777 642 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 ZBTB43O43298 467 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 AKAP8O43823 692 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 PPFIA2O75334 1257 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SNX4O95219 450 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 LRG1P02750 347 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 DLDP09622 509 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 RARGP13631 454 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 GP5P40197 560 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 AMPHP49418 695 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 CPT1AP50416 773 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SESN2P58004 480 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 TLE1Q04724 770 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 YWHAHQ04917 246 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 SGCGQ13326 291 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 IRF3Q14653 427 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SEC23BQ15437 767 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 MAPKAPK3Q16644 382 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 PRICKLE4Q2TBC4 344 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 MPP7Q5T2T1 576 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 DCAF12L1Q5VU92 463 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 VASNQ6EMK4 673 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SLC30A9Q6PML9 568 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 TEPPQ6URK8 271 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SYNE3Q6ZMZ3 975 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 KANSL1Q7Z3B3 1105 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 MIB1Q86YT6 1006 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 DEPDC1BQ8WUY9 529 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 ALG3Q92685 438 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 HOXB13Q92826 284 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 PRAM1Q96QH2 718 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 EIF2AQ9BY44 585 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 DPH1Q9BZG8 443 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 VPS16Q9H269 839 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 PDCL3Q9H2J4 239 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 COPS7BQ9H9Q2 264 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 RXFP3Q9NSD7 469 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SNTG1Q9NSN8 517 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 RBM12Q9NTZ6 932 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 HCFC1R1Q9NWW0 138 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 DERAQ9Y315 318 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 POMT1Q9Y6A1 747 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 ATAD2BQ9ULI0 1458 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 A0A0B4J203 849 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 hCG_1809904A0A1W2PP81 198 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 A0A1W2PPE2 198 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 A0A1W2PR64 198 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 AKR1B15C9JRZ8 316 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 TNPO2O14787 897 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 TBC1D4O60343 1298 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 PSMD10O75832 226 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 METTL18O95568 372 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 TPOP07202 933 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SNRPA1P09661 255 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 EEF2P13639 858 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 HLA-DPA1P20036 260 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 PRDX5P30044 214 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 KCNJ5P48544 419 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 EFEMP1Q12805 493 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 COX10Q12887 443 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 NOLC1Q14978 699 aaKnown RBP eCLIP4.11□□□□□ -1.75
KTN1-220ENST00000555172 ANKRD1Q15327 319 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 NFIL3Q16649 462 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 PLEKHN1Q494U1 663 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 GALNTL6Q49A17 601 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 ZNF484Q5JVG2 852 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 TTC22Q5TAA0 569 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 GARNL3Q5VVW2 1013 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 FIP1L1Q6UN15 594 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 MEX3BQ6ZN04 569 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 Q6ZVL8 140 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 USP51Q70EK9 711 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 RSPH3Q86UC2 560 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 TMEFF1Q8IYR6 380 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms