RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 HNRNPLP14866 589 aaKnown RBP eCLIP12.94□□□□□ -0.348e-8■■□□□ 11.5
CCDC85C-202ENST00000554877 TKTL1P51854 596 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 YWHAEP62258 255 aaKnown RBP12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 MRPS21P82921 87 aaKnown RBP12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 FOXK2Q01167 660 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 PAK1Q13153 545 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 ELF2Q15723 593 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 CRY1Q16526 586 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 CSRP2Q16527 193 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 DPCR1Q3MIW9 517 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 PLK5Q496M5 336 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 SGO2Q562F6 1265 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 GRAMD4Q6IC98 578 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 NUDT18Q6ZVK8 323 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 PIGZQ86VD9 579 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 TRIM59Q8IWR1 403 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 TTC39CQ8N584 583 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 LMO3Q8TAP4 145 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 NUP62CLQ9H1M0 184 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 DUSP15Q9H1R2 295 aaPredicted RBP12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 LRRC4Q9HBW1 653 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 METTL14Q9HCE5 456 aaKnown RBP12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 POLMQ9NP87 494 aaPredicted RBP12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 DLL3Q9NYJ7 618 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 RWDD2AQ9UIY3 292 aa12.94□□□□□ -0.34
CCDC85C-202ENST00000554877 CCDC163A0A0D9SF12 145 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 TCRBV21S2A2A0A5A6 115 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 SDHBP21912 280 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 TNFRSF4P43489 277 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 FMO5P49326 533 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 DHPSP49366 369 aaPredicted RBP12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 RGS7P49802 495 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 YWHAGP61981 247 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 PDE4CQ08493 712 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 EOGTQ5NDL2 527 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 ARMCX6Q7L4S7 300 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 RRAGAQ7L523 313 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 TADA2BQ86TJ2 420 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 PPM1KQ8N3J5 372 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 DEFB119Q8N690 84 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 ZNF513Q8N8E2 541 aaPredicted RBP12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 ANKRD52Q8NB46 1076 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 EDEM1Q92611 657 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 NT5C1BQ96P26 610 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 SRRTQ9BXP5 876 aaKnown RBP12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 ULBP1Q9BZM6 244 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 CYLDQ9NQC7 956 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 WDR35Q9P2L0 1181 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 TSPAN16Q9UKR8 245 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 DMDP11532 3685 aa12.93□□□□□ -0.34
CCDC85C-202ENST00000554877 ZNF292O60281 2723 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 STC2O76061 302 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 ZBED1O96006 694 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 BCKDHBP21953 392 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 CORO1AP31146 461 aaKnown RBP12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 EIF2DP41214 584 aaKnown RBP12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 PSEN1P49768 467 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 CETN1Q12798 172 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 PREPLQ4J6C6 727 aaPredicted RBP12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 ARHGAP17Q68EM7 881 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 TCEAL6Q6IPX3 200 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 SDE2Q6IQ49 451 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 TOGARAM2Q6ZUX3 1019 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 CCDC186Q7Z3E2 898 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 DENND1CQ8IV53 801 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 UBR7Q8N806 425 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 FRMD1Q8N878 549 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 KIAA1958Q8N8K9 716 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 MDGA1Q8NFP4 955 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 KAT5Q92993 513 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 TCEAL3Q969E4 200 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 FAXDC2Q96IV6 333 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 RTKNQ9BST9 563 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 MARCH2Q9P0N8 246 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 EBF1Q9UH73 591 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 STRIP2Q9ULQ0 834 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 USP3Q9Y6I4 520 aa12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 HELZP42694 1942 aaKnown RBP12.92□□□□□ -0.34
CCDC85C-202ENST00000554877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 GREM1O60565 184 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 TSPAN3O60637 253 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 LRP3O75074 770 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 EPN2O95208 641 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 CAVIN2O95810 425 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 KLKB1P03952 638 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 VDRP11473 427 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 TBXAS1P24557 533 aaPredicted RBP12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 MPLP40238 635 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 DGKGP49619 791 aa12.91□□□□□ -0.34
CCDC85C-202ENST00000554877 BCAT1P54687 386 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms