RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 TISP43B9A030 160 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 H3BNC9 293 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 VIPP01282 170 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 NHLRC4P0CG21 123 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-214ENST00000554819 ARP10275 920 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 APEHP13798 732 aaKnown RBP4.7□□□□□ -1.66
SCFD1-214ENST00000554819 YY1P25490 414 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 MST1P26927 711 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 HTR7P34969 479 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 SRSF4Q08170 494 aaKnown RBP4.7□□□□□ -1.66
SCFD1-214ENST00000554819 NSUN2Q08J23 767 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCFD1-214ENST00000554819 ARL6IP4Q66PJ3 421 aaKnown RBP4.7□□□□□ -1.66
SCFD1-214ENST00000554819 RAP1GAP2Q684P5 730 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 VSTM1Q6UX27 236 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 ZNF782Q6ZMW2 699 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-214ENST00000554819 TTC30AQ86WT1 665 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 LINC01465Q8N7H1 131 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCFD1-214ENST00000554819 RITA1Q96K30 269 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 WDR24Q96S15 920 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 USP29Q9HBJ7 922 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 ARFGAP3Q9NP61 516 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 NECTIN3Q9NQS3 549 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 ASIC5Q9NY37 505 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 CA14Q9ULX7 337 aa4.7□□□□□ -1.66
SCFD1-214ENST00000554819 CCDC194A0A1B0GVG4 234 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 TMEM232C9JQI7 657 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 PODXLO00592 558 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 PLA2G6O60733 806 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 LATS1O95835 1130 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 TUBB4AP04350 444 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 HSPA7P48741 367 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 DEUP1Q05D60 604 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 CCDC15Q0P6D6 951 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 FOXF2Q12947 444 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 MTAPQ13126 283 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 DNASE1L3Q13609 305 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 FHL3Q13643 280 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 KCNJ12Q14500 433 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 MPEG1Q2M385 716 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 COLEC12Q5KU26 742 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 SYCP2LQ5T4T6 812 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 GRHL2Q6ISB3 625 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 SRRM1Q8IYB3 904 aaKnown RBP4.69□□□□□ -1.66
SCFD1-214ENST00000554819 C16orf71Q8IYS4 520 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-214ENST00000554819 MAFAQ8NHW3 353 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-214ENST00000554819 KIAA1191Q96A73 305 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 EDC3Q96F86 508 aaKnown RBP4.69□□□□□ -1.66
SCFD1-214ENST00000554819 NUDT22Q9BRQ3 303 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 RXFP3Q9NSD7 469 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 FNIP2Q9P278 1114 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 ASAP1Q9ULH1 1129 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 FZD4Q9ULV1 537 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 PCDHGB2Q9Y5G2 931 aa4.69□□□□□ -1.66
SCFD1-214ENST00000554819 CLIC1O00299 241 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 CA12O43570 354 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 CELA2AP08217 269 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 SRGAP2BP0DMP2 458 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 TMIGD3P0DMS9 266 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-214ENST00000554819 CYP2D6P10635 497 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 CYP2A6P11509 494 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-214ENST00000554819 PECAM1P16284 738 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-214ENST00000554819 MMP8P22894 467 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 PBX1P40424 430 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 GPC5P78333 572 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 UBE4AQ14139 1066 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 KCNB1Q14721 858 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 MFSD13AQ14CX5 517 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 LARS2Q15031 903 aaKnown RBP4.68□□□□□ -1.66
SCFD1-214ENST00000554819 AASDHQ4L235 1098 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-214ENST00000554819 DCDC5Q6ZRR9 648 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 RASGRP3Q8IV61 690 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 SYTL1Q8IYJ3 562 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 C8orf58Q8NAV2 365 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 OVCA2Q8WZ82 227 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 STK33Q9BYT3 514 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 CHST12Q9NRB3 414 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 HELLSQ9NRZ9 838 aa4.68□□□□□ -1.66
SCFD1-214ENST00000554819 PPP6CO00743 305 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 ADAMTS3O15072 1205 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 CBFA2T3O75081 653 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 RNF8O76064 485 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 GLP2RO95838 553 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 ABCB4P21439 1286 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 TECP42680 631 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 HTR3AP46098 478 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 GSTM5P46439 218 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 SEMA3BQ13214 749 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 BRD3Q15059 726 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 RAB30Q15771 203 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 EZH2Q15910 746 aaKnown RBP4.67□□□□□ -1.66
SCFD1-214ENST00000554819 SRSF7Q16629 238 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCFD1-214ENST00000554819 ARHGAP15Q53QZ3 475 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 TMEM196Q5HYL7 178 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 TMTC4Q5T4D3 741 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 RANBP10Q6VN20 620 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 ZNF813Q6ZN06 617 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 TOGARAM2Q6ZUX3 1019 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 DDB2Q92466 427 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 PMM1Q92871 262 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms