RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 MTCH2Q9Y6C9 303 aa15.14■□□□□ 0.01
SHMT2-210ENST00000553950 PRRC2BQ5JSZ5 2229 aaKnown RBP15.14■□□□□ 0.01
SHMT2-210ENST00000553950 CHD9Q3L8U1 2897 aa15.14■□□□□ 0.01
SHMT2-210ENST00000553950 LAMA2P24043 3122 aaKnown RBP15.13■□□□□ 0.01
SHMT2-210ENST00000553950 CCDC195A0A1B0GUA6 201 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 CTAGE9A4FU28 777 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 ZNF840PA6NDX5 716 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 TMEM110-MUSTN1A8MSY1 372 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 GJB6O95452 261 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 KRT7P08729 469 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 SLC2A3P11169 496 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 GABRR2P28476 465 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 DEUP1Q05D60 604 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 ITIH3Q06033 890 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 ZNF252P-AS1Q0IIN9 211 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 GRIN2CQ14957 1233 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 TAF5Q15542 800 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 ACBD5Q5T8D3 534 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-210ENST00000553950 LRRC38Q5VT99 294 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 HFE2Q6ZVN8 426 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 RHOT1Q8IXI2 618 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 C17orf53Q8N3J3 647 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-210ENST00000553950 DQX1Q8TE96 717 aaKnown RBP15.13■□□□□ 0.01
SHMT2-210ENST00000553950 FAM172AQ8WUF8 416 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHMT2-210ENST00000553950 TBCBQ99426 244 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 DDIT4Q9NX09 232 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 DNMT3LQ9UJW3 386 aa15.13■□□□□ 0.01
SHMT2-210ENST00000553950 M0QYT0 321 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 IRAK2O43187 625 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 PRPSAP2O60256 369 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 RFPL2O75678 378 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 TRUB2O95900 331 aaKnown RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 ABL1P00519 1130 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 IGLV3-25P01717 112 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 F11P03951 625 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 RHOP08100 348 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 COMTP21964 271 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 ATP5C1P36542 298 aaKnown RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 OGDHQ02218 1023 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 CDO1Q16878 200 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 ARL13BQ3SXY8 428 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 ODF2Q5BJF6 829 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 BRMS1LQ5PSV4 323 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 C10orf120Q5SQS8 335 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 CES5AQ6NT32 575 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 ANKRD54Q6NXT1 300 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 PSTKQ8IV42 348 aaKnown RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 SLC35F6Q8N357 371 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 VN1R2Q8NFZ6 395 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 NDRG1Q92597 394 aaKnown RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 EDEM1Q92611 657 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 CENPIQ92674 756 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 BTBD6Q96KE9 485 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 NAPGQ99747 312 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 TRIM7Q9C029 511 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 IGFLR1Q9H665 355 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 NMUR1Q9HB89 426 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 ZNF334Q9HCZ1 680 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 DDX56Q9NY93 547 aaKnown RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 NAALADL1Q9UQQ1 740 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 TLR6Q9Y2C9 796 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 HBS1LQ9Y450 684 aaKnown RBP15.12■□□□□ 0.01
SHMT2-210ENST00000553950 ALG6Q9Y672 507 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 TRANK1O15050 2925 aa15.12■□□□□ 0.01
SHMT2-210ENST00000553950 NOTCH4Q99466 2003 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 TRAV19A0A0A6YYK7 116 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 SOX1O00570 391 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-210ENST00000553950 LRCH4O75427 683 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 TADA3O75528 432 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 ENDOD1O94919 500 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 GLP2RO95838 553 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 OAS1P00973 400 aaKnown RBP15.11■□□□□ 0.01
SHMT2-210ENST00000553950 APOEP02649 317 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 FYNP06241 537 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 MYL4P12829 197 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 IGFBP4P22692 258 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 CTNNA2P26232 953 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 CASQ1P31415 396 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 CTNNA1P35221 906 aaKnown RBP15.11■□□□□ 0.01
SHMT2-210ENST00000553950 CETN2P41208 172 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 SSR1P43307 286 aaKnown RBP15.11■□□□□ 0.01
SHMT2-210ENST00000553950 ATP11AP98196 1134 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 RING1Q06587 406 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 RPS6KA1Q15418 735 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 NUGGCQ68CJ6 796 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 TRNP1Q6NT89 227 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 BNIPLQ7Z465 357 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 TAC4Q86UU9 113 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 NT5DC3Q86UY8 548 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 DDX42Q86XP3 938 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHMT2-210ENST00000553950 TEKT4Q8WW24 435 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 NTAN1Q96AB6 310 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 ZNF707Q96C28 371 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-210ENST00000553950 PABPC5Q96DU9 382 aaKnown RBP15.11■□□□□ 0.01
SHMT2-210ENST00000553950 RIPOR3Q96MK2 946 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 ATXN3LQ9H3M9 355 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 IL21Q9HBE4 155 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms