RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TRIM36Q9NQ86 728 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 XPNPEP3Q9NQH7 507 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 AASDHPPTQ9NRN7 309 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 TMEM45AQ9NWC5 275 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 GEMIN8Q9NWZ8 242 aaKnown RBP2.83□□□□□ -1.96
SRP54-204ENST00000553923 BCCIPQ9P287 314 aaKnown RBP eCLIP2.83□□□□□ -1.96
SRP54-204ENST00000553923 ASAP1Q9ULH1 1129 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 FZD4Q9ULV1 537 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 PCDHA7Q9UN72 937 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 USP22Q9UPT9 525 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 SPEF1Q9Y4P9 236 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 COMMD10Q9Y6G5 202 aa2.83□□□□□ -1.96
SRP54-204ENST00000553923 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.82□□□□□ -1.96
SRP54-204ENST00000553923 TMEM272A0A1B0GTI8 110 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 C16orf96A6NNT2 1141 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 ACOT8O14734 319 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 KIF3BO15066 747 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 FYB1O15117 783 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 INPPL1O15357 1258 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 TSPAN6O43657 245 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 IL33O95760 270 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 PLAUP00749 431 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 ALDH2P05091 517 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 FGF3P11487 239 aaPredicted RBP2.82□□□□□ -1.96
SRP54-204ENST00000553923 GNALP38405 381 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 POLD2P49005 469 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 GPC5P78333 572 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 UBE4AQ14139 1066 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 KEAP1Q14145 624 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 CCDC157Q569K6 752 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 ZNF793Q6ZN11 406 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 RFX8Q6ZV50 586 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 TFAP2DQ7Z6R9 452 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 C14orf80Q86SX3 495 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 ZNF329Q86UD4 541 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 IQCF1Q8N6M8 205 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 DNAJB14Q8TBM8 379 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 NUDCD2Q8WVJ2 157 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 MVB12AQ96EY5 273 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 P2RY11Q96G91 374 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 HS6ST2Q96MM7 605 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 TUBB6Q9BUF5 446 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 SCNM1Q9BWG6 230 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 TRIM54Q9BYV2 358 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 MSRB1Q9NZV6 116 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 DNMT3BQ9UBC3 853 aaKnown RBP2.82□□□□□ -1.96
SRP54-204ENST00000553923 NOB1Q9ULX3 412 aaKnown RBP2.82□□□□□ -1.96
SRP54-204ENST00000553923 COG5Q9UP83 839 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 WASHC2CQ9Y4E1 1318 aa2.82□□□□□ -1.96
SRP54-204ENST00000553923 A0A088AWK7 358 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 TRBV5-3A0A0A0MS03 114 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 A0A1W2PPC1 479 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 TMEM233B4DJY2 109 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 MYO1CO00159 1063 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 WDHD1O75717 1129 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 SCGB1D2O95969 90 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 LDHAP00338 332 aaKnown RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 PLGP00747 810 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 MYL1P05976 194 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 NPR1P16066 1061 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 EPHA3P29320 983 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 ALDH7A1P49419 539 aaKnown RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 EPHB1P54762 984 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 P2RX3P56373 397 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 HSP90AB4PQ58FF6 505 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 TMEM240Q5SV17 173 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 CC2D1BQ5T0F9 858 aaKnown RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 LMBRD2Q68DH5 695 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 CCSAPQ6IQ19 270 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 FBXL22Q6P050 247 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 ZDHHC24Q6UX98 284 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 NPNTQ6UXI9 565 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 FAM57BQ71RH2 274 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 SPATA2LQ8IUW3 424 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 C16orf71Q8IYS4 520 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 CHPFQ8IZ52 775 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 SPARTQ8N0X7 666 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 MYO1HQ8N1T3 1032 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 TMEM255BQ8WV15 326 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 KBTBD7Q8WVZ9 684 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 RAPGEF4Q8WZA2 1011 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 EVI5LQ96CN4 794 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 ZBTB45Q96K62 511 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 GATA5Q9BWX5 397 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 ASPSCR1Q9BZE9 553 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 MS4A7Q9GZW8 240 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 UBA5Q9GZZ9 404 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 SMURF2Q9HAU4 748 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 DECR2Q9NUI1 292 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 CPA4Q9UI42 421 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 ERRFI1Q9UJM3 462 aaPredicted RBP2.81□□□□□ -1.96
SRP54-204ENST00000553923 PNMA2Q9UL42 364 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 CDY1Q9Y6F8 540 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 SPATA31A1Q5TZJ5 1347 aa2.81□□□□□ -1.96
SRP54-204ENST00000553923 CCDC189A1A4V9 331 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 AGPSO00116 658 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 BTN3A1O00481 513 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 CD3EAPO15446 510 aaKnown RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 AKAP10O43572 662 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms