RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 GPC5P78333 572 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 CFHR1Q03591 330 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 KCNAB1Q14722 419 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 SEC23BQ15437 767 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 PFKFB3Q16875 520 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-210ENST00000553693 MANEALQ5VSG8 457 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 ANKRD13BQ86YJ7 626 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 ANKRD13AQ8IZ07 590 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 FSTL5Q8N475 847 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-210ENST00000553693 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCFD1-210ENST00000553693 NRACQ8N912 160 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 WACQ9BTA9 647 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 UNKQ9C0B0 810 aaKnown RBP4.75□□□□□ -1.65
SCFD1-210ENST00000553693 NUP62CLQ9H1M0 184 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 PNPLA8Q9NP80 782 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 FZD4Q9ULV1 537 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 G3BP2Q9UN86 482 aaKnown RBP4.75□□□□□ -1.65
SCFD1-210ENST00000553693 COL15A1P39059 1388 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 CACNA1IQ9P0X4 2223 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 LY6G6EA0A0G2JKS1 128 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 THAP12O43422 761 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 PRF1P14222 555 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 ATF7P17544 494 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-210ENST00000553693 SCP2P22307 547 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 HTRA4P83105 476 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-210ENST00000553693 DEUP1Q05D60 604 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 SRSF1Q07955 248 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCFD1-210ENST00000553693 CCDC15Q0P6D6 951 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 SLC14A1Q13336 389 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 SEMA5AQ13591 1074 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 FHL1Q13642 323 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 RNF44Q7L0R7 432 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 P3H2Q8IVL5 708 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 IQCDQ96DY2 449 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 FAM227BQ96M60 508 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 SELENOOQ9BVL4 669 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 HEYLQ9NQ87 328 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-210ENST00000553693 OBP2AQ9NY56 170 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 ASAP1Q9ULH1 1129 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 SNX13Q9Y5W8 968 aa4.74□□□□□ -1.65
SCFD1-210ENST00000553693 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-210ENST00000553693 TRIM38O00635 465 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 FYB1O15117 783 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 INSIG1O15503 277 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 CNOT3O75175 753 aaKnown RBP4.73□□□□□ -1.65
SCFD1-210ENST00000553693 USP12O75317 370 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 NTN1O95631 604 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 HOXD9P28356 352 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-210ENST00000553693 DGKQP52824 942 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 FOXG1P55316 489 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-210ENST00000553693 SLC9C1Q4G0N8 1177 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 UBE2Q1Q7Z7E8 422 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 KRT78Q8N1N4 520 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 KAZALD1Q96I82 304 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 ADGRE3Q9BY15 652 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 SLC25A32Q9H2D1 315 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 SHROOM4Q9ULL8 1493 aa4.73□□□□□ -1.65
SCFD1-210ENST00000553693 SPATA31A1Q5TZJ5 1347 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 INPPL1O15357 1258 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 TLR2O60603 784 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 WDR47O94967 919 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 CD63P08962 238 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 SNHG28P0DPA3 235 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 CTSAP10619 480 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 HOXB6P17509 224 aaKnown RBP4.72□□□□□ -1.65
SCFD1-210ENST00000553693 ATF3P18847 181 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 HTR7P34969 479 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 JAK3P52333 1124 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 YPEL5P62699 121 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 DAG1Q14118 895 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 FAM110CQ1W6H9 321 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 ZNF517Q6ZMY9 492 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-210ENST00000553693 SKAP1Q86WV1 359 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 NSMCE1Q8WV22 266 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 TTC17Q96AE7 1141 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 RNF26Q9BY78 433 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-210ENST00000553693 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 ARL8BQ9NVJ2 186 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 PCDHGB6Q9Y5F9 930 aa4.72□□□□□ -1.65
SCFD1-210ENST00000553693 FAM90A10PA6NDY2 464 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 CA12O43570 354 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 PRAMEF2O60811 474 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 IL18RAPO95256 599 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 TMIGD3P0DMS9 266 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-210ENST00000553693 KPNB1Q14974 876 aaKnown RBP4.71□□□□□ -1.66
SCFD1-210ENST00000553693 TRIM71Q2Q1W2 868 aaKnown RBP4.71□□□□□ -1.66
SCFD1-210ENST00000553693 KRT28Q7Z3Y7 464 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 ARFGAP1Q8N6T3 406 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 TTC8Q8TAM2 541 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 PHKBQ93100 1093 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 VCPIP1Q96JH7 1222 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 TRMOQ9BU70 441 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 NUAK2Q9H093 628 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 FOXP1Q9H334 677 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-210ENST00000553693 POT1Q9NUX5 634 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 TBC1D23Q9NUY8 699 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 TMEM184CQ9NVA4 438 aa4.71□□□□□ -1.66
SCFD1-210ENST00000553693 F8W8V4 182 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 CCNT2O60583 730 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms