RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 C18orf25Q96B23 403 aaPredicted RBP6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 RSPRY1Q96DX4 576 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 WBP1Q96G27 269 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 IFT74Q96LB3 600 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 UROC1Q96N76 676 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PGLYRP2Q96PD5 576 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TCF12Q99081 682 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TRIM4Q9C037 500 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CCDC113Q9H0I3 377 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 C8orf33Q9H7E9 229 aaPredicted RBP6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 HSPBP1Q9NZL4 362 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CEP72Q9P209 647 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ORC3Q9UBD5 711 aaPredicted RBP6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FBXL5Q9UKA1 691 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MGAQ8IWI9 3026 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ATG2BQ96BY7 2078 aa6.05□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ARID2Q68CP9 1835 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 STK36Q9NRP7 1315 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 BTBD18B2RXH4 712 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SPECC1L-ADORA2AF8WAN1 911 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 H7C4K7 107 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CHADO15335 359 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 NDUFB5O43674 189 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TLX3O43711 291 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MOSPD3O75425 235 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 OR4Q2P0C623 313 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CYP11B2P19099 503 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MARCKSP29966 332 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MCM7P33993 719 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 NAMPTP43490 491 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SERINC3Q13530 473 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 HNRNPDQ14103 355 aaKnown RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PON2Q15165 354 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PPP2R5AQ15172 486 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TAF1BQ53T94 588 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 STXBP5Q5T5C0 1151 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SLC8B1Q6J4K2 584 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ZNF280DQ6N043 979 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TOGARAM2Q6ZUX3 1019 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CENPQQ7L2Z9 268 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 RALGPS2Q86X27 583 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ZSWIM9Q86XI8 627 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TMC8Q8IU68 726 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 MFSD6LQ8IWD5 586 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 NECAB1Q8N987 351 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 WASF1Q92558 559 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 LIN37Q96GY3 246 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ZMAT2Q96NC0 199 aaKnown RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TCHPQ9BT92 498 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CCDC94Q9BW85 323 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TMEM60Q9H2L4 133 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FSCN3Q9NQT6 498 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TOPORSQ9NS56 1045 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SLC38A7Q9NVC3 462 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 GTSE1Q9NYZ3 720 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 EBF1Q9UH73 591 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TPCN1Q9ULQ1 816 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 YIPF1Q9Y548 306 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PAXBP1Q9Y5B6 917 aa6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TIMM13Q9Y5L4 95 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PLXNB3Q9ULL4 1909 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FLNCQ14315 2725 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 COL6A6A6NMZ7 2263 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 K7ERI5 159 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SYN3O14994 580 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TMPRSS2O15393 492 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SH3BP5O60239 455 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PFKFB2O60825 505 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SOAT2O75908 522 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CTDNEP1O95476 244 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TSPAN15O95858 294 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 XRCC6P12956 609 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 KRT10P13645 584 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 BCKDHBP21953 392 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 GBP1P32455 592 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ANP32AP39687 249 aaKnown RBP6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 IL12RB1P42701 662 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 EFNA5P52803 228 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 EPHB3P54753 998 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 EPHA5P54756 1037 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 PEX3P56589 373 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 GUCY1B3Q02153 619 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SPAG1Q07617 926 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TNK2Q07912 1038 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 DUSP4Q13115 394 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ORC1Q13415 861 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TRIM29Q14134 588 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 LY6DQ14210 128 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ZNF174Q15697 407 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SEZ6Q53EL9 994 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 FYB2Q5VWT5 728 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TPGS2Q68CL5 300 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 SLC23A3Q6PIS1 610 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TTLL10Q6ZVT0 673 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 ARID3BQ8IVW6 561 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 DIS3L2Q8IYB7 885 aaKnown RBP6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 CNPY4Q8N129 248 aa6.03□□□□□ -1.44
SMARCE1P3-201ENST00000553649 TTC16Q8NEE8 873 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms