RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 INSCQ1MX18 579 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 RNF43Q68DV7 783 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 FRMD7Q6ZUT3 714 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CCDC24Q8N4L8 307 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 P2RX5Q93086 422 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 GJA10Q969M2 543 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 BRIP1Q9BX63 1249 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 CADM1Q9BY67 442 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 ZFYVE28Q9HCC9 887 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 KLHL3Q9UH77 587 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 AGO2Q9UKV8 859 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 MTO1Q9Y2Z2 717 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 RALGAPBQ86X10 1494 aa9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 POLR3AO14802 1390 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-203ENST00000553612 A0A087WXM4 84 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 A0A1W2PPW3 197 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 STX7O15400 261 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 RBL1P28749 1068 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 ALDH4A1P30038 563 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 NECTIN1Q15223 517 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM205BPQ63HN1 556 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 RAP1GAP2Q684P5 730 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 TMC3Q7Z5M5 1100 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 DEFB107AQ8IZN7 70 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 NSUN6Q8TEA1 469 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 BTBD6Q96KE9 485 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 VPS11Q9H270 941 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 CFL2Q9Y281 166 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 GAKO14976 1311 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 COPEO14579 308 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 ZMPSTE24O75844 475 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 KDM4BO94953 1096 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 GH1P01241 217 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 UBXN2AP68543 259 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 MTFR1Q15390 333 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 COLGALT2Q8IYK4 626 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 METTL6Q8TCB7 284 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 PRMT8Q9NR22 394 aaPredicted RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 STOML2Q9UJZ1 356 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 RAD54BQ9Y620 910 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 A0A0G2JLW4 131 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 HSPD1P10809 573 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 GPC1P35052 558 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 EIF6P56537 245 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 C6orf132Q5T0Z8 1188 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FBXO33Q7Z6M2 555 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 URGCPQ8TCY9 931 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 SUCLG2Q96I99 432 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 C12orf57Q99622 126 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FRMD8Q9BZ67 464 aaPredicted RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 PABPC3Q9H361 631 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM96AQ9H5X1 160 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FBXO6Q9NRD1 293 aaPredicted RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 AIPL1Q9NZN9 384 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 OR6C70A6NIJ9 312 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FCHO1O14526 889 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 PJA2O43164 708 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 ITGA4P13612 1032 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 POLR2CP19387 275 aaPredicted RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 RACK1P63244 317 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 TMEM26Q6ZUK4 368 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 TPH2Q8IWU9 490 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 UBE2J2Q8N2K1 259 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 PTCD2Q8WV60 388 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 TBCDQ9BTW9 1192 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 ING3Q9NXR8 418 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 POLIQ9UNA4 740 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 IFT52Q9Y366 437 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FPGT-TNNI3KV9GXZ4 949 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 SOS2Q07890 1332 aaPredicted RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 CLASP2O75122 1294 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 SNAP25P60880 206 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 RPP30P78346 268 aaKnown RBP9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 PRKCEQ02156 737 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 SMARCB1Q12824 385 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 AP3B2Q13367 1082 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 SFT2D3Q587I9 215 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM47AQ5JRC9 791 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 USPL1Q5W0Q7 1092 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 ANGPTL8Q6UXH0 198 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 SEC22CQ9BRL7 303 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 HGH1Q9BTY7 390 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 IMPAD1Q9NX62 359 aa9.26□□□□□ -0.93
GTF2A1-203ENST00000553612 LGALS16A8MUM7 142 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 SERPING1P05155 500 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CYP7A1P22680 504 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 MMP8P22894 467 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PRKCQQ04759 706 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 KCNT1Q5JUK3 1230 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CHERPQ8IWX8 916 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 NEDD1Q8NHV4 660 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 AFG1LQ8WV93 481 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 MANSC1Q9H8J5 431 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 SSH2Q76I76 1423 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 DFFAO00273 331 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms