RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 GIMAP8Q8ND71 665 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-222ENST00000553570 OR5AN1Q8NGI8 311 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 CYP2W1Q8TAV3 490 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 MORC4Q8TE76 937 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 GAB3Q8WWW8 586 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 GLG1Q92896 1179 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 LOXL4Q96JB6 756 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 C8orf49Q96NF6 230 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 MXRA8Q9BRK3 442 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 SDF4Q9BRK5 362 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 SOX7Q9BT81 388 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 HAPLN2Q9GZV7 340 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 MAF1Q9H063 256 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 ZMYND12Q9H0C1 365 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 TRPV6Q9H1D0 765 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 UPF3AQ9H1J1 476 aaKnown RBP5.25□□□□□ -1.57
ATXN3-222ENST00000553570 SEC61A2Q9H9S3 476 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 SH3GLB2Q9NR46 395 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-222ENST00000553570 ST6GALNAC2Q9UJ37 374 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 PNMA8BQ9ULN7 279 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-222ENST00000553570 Q9Y3F1 56 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 CDY2AQ9Y6F7 541 aa5.25□□□□□ -1.57
ATXN3-222ENST00000553570 TRIP11Q15643 1979 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 C1QTNF3-AMACRE9PGA6 284 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 H3BQV1 296 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 MATN2O00339 956 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 FIBPO43427 364 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CCNT1O60563 726 aaKnown RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 ATP9AO75110 1047 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 PPFIA4O75335 1185 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 STAM2O75886 525 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 BAG4O95429 457 aaKnown RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CTDNEP1O95476 244 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 HSP90AA1P07900 732 aaKnown RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 MMP3P08254 477 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CLTBP09497 229 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 UBA1P22314 1058 aaKnown RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 EDNRBP24530 442 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 MARK3P27448 753 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 KRT2P35908 639 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 SLC5A3P53794 718 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CCL23P55773 120 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 ARHGAP1Q07960 439 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 SPIDRQ14159 915 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 NONOQ15233 471 aaKnown RBP eCLIP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CDSNQ15517 529 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 PTGISQ16647 500 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 TBR1Q16650 682 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 KIAA0753Q2KHM9 967 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 LETM2Q2VYF4 491 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 HSDL1Q3SXM5 330 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 MBNL2Q5VZF2 373 aaKnown RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 TMEM200BQ69YZ2 307 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 GRAMD4Q6IC98 578 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CXorf57Q6NSI4 855 aaKnown RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 XRRA1Q6P2D8 792 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 PIK3AP1Q6ZUJ8 805 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 LARP4Q71RC2 724 aaKnown RBP eCLIP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 EPM2AIP1Q7L775 607 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 PPM1NQ8N819 430 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CDYL2Q8N8U2 506 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 TBCKQ8TEA7 893 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 BADQ92934 168 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 GTF3C6Q969F1 213 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 CDHR1Q96JP9 859 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 C8orf76Q96K31 380 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 FDXACB1Q9BRP7 624 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 ZNF577Q9BSK1 485 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 ACE2Q9BYF1 805 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 FTOQ9C0B1 505 aaKnown RBP eCLIP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 JADE2Q9NQC1 790 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 GEMIN8Q9NWZ8 242 aaKnown RBP5.24□□□□□ -1.57
ATXN3-222ENST00000553570 SMC3Q9UQE7 1217 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 LTBP2Q14767 1821 aa5.24□□□□□ -1.57
ATXN3-222ENST00000553570 ELP1O95163 1332 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 MROH7Q68CQ1 1323 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 BTBD18B2RXH4 712 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 CTAGE5O15320 804 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 MAFGO15525 162 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 CHMP2AO43633 222 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 SUPT20HL2P0C7V6 817 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 CYP2C9P11712 490 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 FDPSP14324 419 aaKnown RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 LPOP22079 712 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 CYP2C18P33260 490 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 TCF7P36402 384 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 GPR15P49685 360 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 ADKP55263 362 aaKnown RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 TBX4P57082 545 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 PURAQ00577 322 aaKnown RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 ADRM1Q16186 407 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 RNF151Q2KHN1 245 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 CEP55Q53EZ4 464 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 KRT40Q6A162 431 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 CCSAPQ6IQ19 270 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 GALNT17Q6IS24 598 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 SWSAP1Q6NVH7 229 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 DBX2Q6ZNG2 339 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms