RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ACO1P21399 889 aaKnown RBP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 HIBADHP31937 336 aaKnown RBP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 RBM5P52756 815 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 SP2Q02086 613 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 SF3A3Q12874 501 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 MTAPQ13126 283 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 GEN1Q17RS7 908 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 LY6KQ17RY6 165 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 SPDYE7PQ495Y7 208 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 NRN1LQ496H8 165 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 DSTYKQ6XUX3 929 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 C4orf50Q6ZRC1 276 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 PIK3AP1Q6ZUJ8 805 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 SYT13Q7L8C5 426 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 RASGRP2Q7LDG7 609 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 DTX2Q86UW9 622 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 Q8N1X5 172 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 LRRC71Q8N4P6 559 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 METTL25Q8N6Q8 603 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 C11orf44Q8N8P7 122 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 HMGB4Q8WW32 186 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 ATG4AQ8WYN0 398 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 RFFLQ8WZ73 363 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 OVCA2Q8WZ82 227 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 ZBTB10Q96DT7 871 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 NEUROD6Q96NK8 337 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 REEP2Q9BRK0 252 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 ZNF747Q9BV97 191 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 GALNT9Q9HCQ5 603 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 TRIM36Q9NQ86 728 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 RXFP3Q9NSD7 469 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 TBC1D22BQ9NU19 505 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 BLOC1S4Q9NUP1 217 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 LIN7CQ9NUP9 197 aaKnown RBP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 IRAK4Q9NWZ3 460 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 NKX1-2Q9UD57 310 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 STEAP1Q9UHE8 339 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 DRG1Q9Y295 367 aaKnown RBP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 NOX1Q9Y5S8 564 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 GXYLT2A0PJZ3 443 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 F5H0A9 414 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-209ENST00000553280 EXOC5O00471 708 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 PPM1DO15297 605 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 CTIFO43310 598 aaKnown RBP5.69□□□□□ -1.5
SCFD1-209ENST00000553280 WDR47O94967 919 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 TACR2P21452 398 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 PBX1P40424 430 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 VAV2P52735 878 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 ATXN1P54253 815 aaKnown RBP5.69□□□□□ -1.5
SCFD1-209ENST00000553280 RRP1BQ14684 758 aaKnown RBP5.69□□□□□ -1.5
SCFD1-209ENST00000553280 PRKD1Q15139 912 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-209ENST00000553280 TBRG1Q3YBR2 411 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 CTXN3Q4LDR2 81 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 TMEM196Q5HYL7 178 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 ZNF569Q5MCW4 686 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 L1TD1Q5T7N2 865 aaKnown RBP5.69□□□□□ -1.5
SCFD1-209ENST00000553280 SLC9A4Q6AI14 798 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 DGAT2L7PQ6IED9 249 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 ARMC6Q6NXE6 501 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 ST8SIA4Q92187 359 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 MCRS1Q96EZ8 462 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 MECRQ9BV79 373 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 AGXT2Q9BYV1 514 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 TMLHEQ9NVH6 421 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 NRBP1Q9UHY1 535 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 DNAJC16Q9Y2G8 782 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 ZBTB1Q9Y2K1 713 aa5.69□□□□□ -1.5
SCFD1-209ENST00000553280 RNASET2O00584 256 aaKnown RBP5.68□□□□□ -1.5
SCFD1-209ENST00000553280 TSPAN3O60637 253 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 TBX18O95935 607 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 CYP21A2P08686 494 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 GSTM5P46439 218 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 MTHFSP49914 203 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 P3H1Q32P28 736 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 NBPF8Q3BBV2 869 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 FAM90A2PQ658T7 463 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 ATG16L1Q676U5 607 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 CRIP3Q6Q6R5 217 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 RAB11FIP4Q86YS3 637 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 SYNE4Q8N205 404 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 TCP11L2Q8N4U5 519 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 SLC22A17Q8WUG5 538 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 CENPIQ92674 756 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-209ENST00000553280 EDAQ92838 391 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 FUBP1Q96AE4 644 aaKnown RBP5.68□□□□□ -1.5
SCFD1-209ENST00000553280 RSPRY1Q96DX4 576 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 RNF31Q96EP0 1072 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 ACTRT3Q9BYD9 372 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 ALOXE3Q9BYJ1 711 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 PAIP1Q9H074 479 aaKnown RBP5.68□□□□□ -1.5
SCFD1-209ENST00000553280 CCDC134Q9H6E4 229 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 AKIP1Q9NQ31 210 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 MAP3K2Q9Y2U5 619 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 TESMINQ9Y4I5 508 aa5.68□□□□□ -1.5
SCFD1-209ENST00000553280 A0A087X0M5 115 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 LOC105369274A0A096LPK9 316 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 LOC102723532A0A0G2JNH3 316 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 A0A1B0GX30 115 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms