RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 SMARCD1Q96GM5 515 aa9.45□□□□□ -0.9
RAB3IP-218ENST00000553099 KCTD15Q96SI1 283 aaPredicted RBP9.45□□□□□ -0.9
RAB3IP-218ENST00000553099 C11orf84Q9BUA3 381 aaPredicted RBP9.45□□□□□ -0.9
RAB3IP-218ENST00000553099 NRDE2Q9H7Z3 1164 aa9.45□□□□□ -0.9
RAB3IP-218ENST00000553099 POPDC2Q9HBU9 364 aa9.45□□□□□ -0.9
RAB3IP-218ENST00000553099 UBN1Q9NPG3 1134 aa9.45□□□□□ -0.9
RAB3IP-218ENST00000553099 NAALADL1Q9UQQ1 740 aa9.45□□□□□ -0.9
RAB3IP-218ENST00000553099 TCRBV7S3A2A0A539 114 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 YJEFN3A6XGL0 299 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 E7ENQ6 273 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 CREB3O43889 395 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 AGTP01019 485 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 NCAM1P13591 858 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 RBL1P28749 1068 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 NOS2P35228 1153 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 ARL4AP40617 200 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 GBE1Q04446 702 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 RNASELQ05823 741 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 DEUP1Q05D60 604 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 MBTPS1Q14703 1052 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 SLC9A4Q6AI14 798 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 OVOS1Q6IE37 1185 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 GLB1LQ6UWU2 654 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 ARCQ7LC44 396 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 STRADAQ7RTN6 431 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 CCDC13Q8IYE1 715 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 ZMIZ2Q8NF64 920 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 PXYLP1Q8TE99 480 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 KCTD13Q8WZ19 329 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 MRRFQ96E11 262 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 TMEM209Q96SK2 561 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 FOXP3Q9BZS1 431 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 STMN4Q9H169 189 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 SLC12A6Q9UHW9 1150 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 EXOC1LA0A1B0GW35 172 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 A6NNZ2 444 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 FOXO6A8MYZ6 492 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 E7EVH7 732 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 NDUFAB1O14561 156 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 NDC80O14777 642 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 TMEM63AO94886 807 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 IVLP07476 585 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 FAM163BP0C2L3 166 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 AMPD1P23109 780 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 STIP1P31948 543 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 GRK4P32298 578 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 SEC24CP53992 1094 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 TUBB8Q3ZCM7 444 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 FAM26DQ5JW98 314 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 FAXCQ5TGI0 409 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 LHX8Q68G74 356 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 NETO2Q8NC67 525 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 EDEM1Q92611 657 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 CSPG4P5Q96PW8 444 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 RTP3Q9BQQ7 232 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 CCDC77Q9BR77 488 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 ROPN1BQ9BZX4 212 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 ROPN1Q9HAT0 212 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 MTMR10Q9NXD2 777 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 CWC15Q9P013 229 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 RSPH14Q9UHP6 348 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 XPO7Q9UIA9 1087 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 PRG3Q9Y2Y8 225 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 FARP1Q9Y4F1 1045 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 PTCH2Q9Y6C5 1203 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 PTPRDP23468 1912 aa9.44□□□□□ -0.9
RAB3IP-218ENST00000553099 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 POC1B-GALNT4F8VUJ3 575 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 ARL4CP56559 192 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 DAOAP59103 153 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 BBS9Q3SYG4 887 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 OTUD1Q5VV17 481 aaPredicted RBP9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 TAOK1Q7L7X3 1001 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 ZNF598Q86UK7 904 aaKnown RBP9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 RTN4RL1Q86UN2 441 aaPredicted RBP9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 ZNF280BQ86YH2 543 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 OR10T2Q8NGX3 314 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 SH3TC2Q8TF17 1288 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 ARHGEF2Q92974 986 aaKnown RBP9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 FAF2Q96CS3 445 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 TMEM109Q9BVC6 243 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 PIGVQ9NUD9 493 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 ETNK2Q9NVF9 386 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 TMLHEQ9NVH6 421 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 MFHAS1Q9Y4C4 1052 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 NUP205Q92621 2012 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 MYO16Q9Y6X6 1858 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 SHROOM3Q8TF72 1996 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 A0A087WUV0 522 aaPredicted RBP9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 KBTBD13C9JR72 458 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 B4GALT3O60512 393 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 FBXO21O94952 628 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 LTFP02788 710 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 CHN1P15882 459 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 OR1G1P47890 313 aa9.43□□□□□ -0.9
RAB3IP-218ENST00000553099 CCT5P48643 541 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms