RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 STARD6P59095 220 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 TAF5Q15542 800 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 ITPRIPL2Q3MIP1 535 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 FIGNQ5HY92 759 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 OR6B2Q6IFH4 312 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 FAM183BPQ6ZVS7 135 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 IRF2BP2Q7Z5L9 587 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 GAS2L3Q86XJ1 694 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 FBXL6Q8N531 539 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 IPO4Q8TEX9 1081 aaKnown RBP14.77□□□□□ -0.05
PTCH1-226ENST00000553011 RNF139Q8WU17 664 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 CPA5Q8WXQ8 436 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 GOLGA1Q92805 767 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 SHDQ96IW2 340 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 PCDHB18PQ96TA0 734 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 DDX23Q9BUQ8 820 aaKnown RBP14.77□□□□□ -0.05
PTCH1-226ENST00000553011 FOXQ1Q9C009 403 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 OLA1Q9NTK5 396 aaKnown RBP14.77□□□□□ -0.05
PTCH1-226ENST00000553011 SFMBT1Q9UHJ3 866 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 STRIP2Q9ULQ0 834 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 MYO6Q9UM54 1294 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 CACNA1HO95180 2353 aa14.77□□□□□ -0.05
PTCH1-226ENST00000553011 SPECC1L-ADORA2AF8WAN1 911 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 SART1O43290 800 aaKnown RBP14.76□□□□□ -0.05
PTCH1-226ENST00000553011 MSI1O43347 362 aaKnown RBP14.76□□□□□ -0.05
PTCH1-226ENST00000553011 GREM1O60565 184 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 STC2O76061 302 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 CTHP32929 405 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 VCPP55072 806 aaKnown RBP14.76□□□□□ -0.05
PTCH1-226ENST00000553011 GOLGA8FQ08AF8 430 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 GOLGA8DPQ0D2H9 430 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 C2CD6Q53TS8 623 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 MSANTD2Q6P1R3 559 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 TXNDC11Q6PKC3 985 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 FMNL3Q8IVF7 1028 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 BBS7Q8IWZ6 715 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 KIAA1958Q8N8K9 716 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 ATP2A3Q93084 1043 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 AGPAT1Q99943 283 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 EDEM3Q9BZQ6 932 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 RBSNQ9H1K0 784 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 ECT2Q9H8V3 914 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 NAALADL1Q9UQQ1 740 aa14.76□□□□□ -0.05
PTCH1-226ENST00000553011 MTF2Q9Y483 593 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-226ENST00000553011 KANSL1LA0AUZ9 987 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 SLC9A3R1O14745 358 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 AP5Z1O43299 807 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 CBFA2T2O43439 604 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 PI15O43692 258 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 GRAP2O75791 330 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 KLKB1P03952 638 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 CYP1A1P04798 512 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 CYP17A1P05093 508 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 TPM3P06753 285 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 NCAM1P13591 858 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 COG7P83436 770 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 UBXN2BQ14CS0 331 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 ASIC2Q16515 512 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 SFMBT2Q5VUG0 894 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 SYPL2Q5VXT5 272 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 OLFML1Q6UWY5 402 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 TRIM72Q6ZMU5 477 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 HTR3DQ70Z44 454 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 ERICH1Q86X53 443 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 SUGP1Q8IWZ8 645 aaKnown RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 ADGRG2Q8IZP9 1017 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 CPA6Q8N4T0 437 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 OLIG1Q8TAK6 271 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 DQX1Q8TE96 717 aaKnown RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 CPLX3Q8WVH0 158 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 C18orf8Q96DM3 657 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 CHFRQ96EP1 664 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 NUP58Q9BVL2 599 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 C8orf33Q9H7E9 229 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 LTB4R2Q9NPC1 389 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 SEPT11Q9NVA2 429 aaKnown RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 TBC1D14Q9P2M4 693 aa14.75□□□□□ -0.05
PTCH1-226ENST00000553011 LSM7Q9UK45 103 aaKnown RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 NDRG2Q9UN36 371 aaKnown RBP14.75□□□□□ -0.05
PTCH1-226ENST00000553011 ITIH6Q6UXX5 1313 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 KIAA1549LQ6ZVL6 1849 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 A0A1W2PQJ5 194 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 MAN2B1O00754 1011 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 CAPN9O14815 690 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 NFATC1O95644 943 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 GYPCP04921 128 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 CCDC172P0C7W6 258 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 GLULP15104 373 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 AOC1P19801 751 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 TARSP26639 723 aaKnown RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 CORO1AP31146 461 aaKnown RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 GJA4P35212 333 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 GABRB2P47870 512 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 MLLT6P55198 1093 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 SNX16P57768 344 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 YWHAZP63104 245 aaKnown RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 PITX1P78337 314 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-226ENST00000553011 SLC6A3Q01959 620 aa14.74□□□□□ -0.05
PTCH1-226ENST00000553011 DHCR24Q15392 516 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms