RNA–Protein interactions for RNA: ENST00000552985.5

TPCN1-223, Transcript of two pore segment channel 1, human

TSL 3

Gene TPCN1, Length 762 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPCN1-223	ENST00000552985	TBC1D14	Q9P2M4	693 aa		11.79	□□□□□ -0.52
TPCN1-223	ENST00000552985	TJP2	Q9UDY2	1190 aa		11.79	□□□□□ -0.52
TPCN1-223	ENST00000552985	SIK3	Q9Y2K2	1263 aa		11.79	□□□□□ -0.52
TPCN1-223	ENST00000552985	RIF1	Q5UIP0	2472 aa	Known RBP	11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SYCE3	A1L190	88 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	ANTXRL	A6NF34	631 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	LGALS16	A8MUM7	142 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	LAMTOR5	O43504	91 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	MED7	O43513	233 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SP9	P0CG40	484 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	HOXC13	P31276	330 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SLC6A11	P48066	632 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	LRRC32	Q14392	662 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	MEA1	Q16626	185 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	DGKK	Q5KSL6	1271 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	TSSK4	Q6SA08	328 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	RSRC2	Q7L4I2	434 aa	Known RBP	11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	TADA2B	Q86TJ2	420 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	TMEM25	Q86YD3	366 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	PASD1	Q8IV76	773 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SFTPA1	Q8IWL2	248 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SCUBE3	Q8IX30	993 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	CD101	Q93033	1021 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	P2RY11	Q96G91	374 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	BPIFA3	Q9BQP9	254 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SLC4A5	Q9BY07	1137 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	MIS12	Q9H081	205 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	PLCB1	Q9NQ66	1216 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	PRMT8	Q9NR22	394 aa	Predicted RBP	11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	ST7	Q9NRC1	585 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SFMBT1	Q9UHJ3	866 aa		11.78	□□□□□ -0.52
TPCN1-223	ENST00000552985	SLC12A8	A0AV02	714 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	LRRC10B	A6NIK2	292 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985		E5RJQ4	531 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985		F8VZ95	297 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	PAPSS1	O43252	624 aa	Predicted RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	MSI1	O43347	362 aa	Known RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	ADH1C	P00326	375 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	LTF	P02788	710 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	FYN	P06241	537 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	TPM2	P07951	284 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	ADH5	P11766	374 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	CDK11B	P21127	795 aa	Known RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	AMPD2	Q01433	879 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	SATB1	Q01826	763 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	CSTF1	Q05048	431 aa	Known RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	PTK2	Q05397	1052 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	GOLGA8F	Q08AF8	430 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	GOLGA8DP	Q0D2H9	430 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	PDCL	Q13371	301 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	SYCP1	Q15431	976 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	FKBP15	Q5T1M5	1219 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	FMNL3	Q8IVF7	1028 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	STK32A	Q8WU08	396 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	IRGQ	Q8WZA9	623 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	OTUB2	Q96DC9	234 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	PIWIL1	Q96J94	861 aa	Known RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	CPXM1	Q96SM3	734 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	STK33	Q9BYT3	514 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	NAT10	Q9H0A0	1025 aa	Known RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	IRF2BPL	Q9H1B7	796 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	SPHK2	Q9NRA0	654 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	LSM7	Q9UK45	103 aa	Known RBP	11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	PCDHGC3	Q9UN70	934 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	GPR179	Q6PRD1	2367 aa		11.77	□□□□□ -0.53
TPCN1-223	ENST00000552985	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	FAM170A	A1A519	330 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	TRIM24	O15164	1050 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	HOXC11	O43248	304 aa	Predicted RBP	11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	RNF40	O75150	1001 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	FBXO21	O94952	628 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	TDGF1	P13385	188 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	DRD1	P21728	446 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	CORO1A	P31146	461 aa	Known RBP	11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	ACADSB	P45954	432 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	ZNF165	P49910	485 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	POLR2F	P61218	127 aa	Known RBP	11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	COG7	P83436	770 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	UBXN1	Q04323	297 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	GAD2	Q05329	585 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	KDSR	Q06136	332 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	IQCB1	Q15051	598 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	MSANTD2	Q6P1R3	559 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	MAMSTR	Q6ZN01	415 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	TPGS1	Q6ZTW0	290 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	TMEM110	Q86TL2	294 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	NOP9	Q86U38	636 aa	Known RBP	11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	DENND1C	Q8IV53	801 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	ETFBKMT	Q8IXQ9	262 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	SPEM1	Q8N4L4	309 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	NAT16	Q8N8M0	369 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	C1orf131	Q8NDD1	294 aa	Known RBP	11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	ANKRD20A12P	Q8NF67	263 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	RNF139	Q8WU17	664 aa		11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	DDX1	Q92499	740 aa	Known RBP	11.76	□□□□□ -0.53
TPCN1-223	ENST00000552985	IER2	Q9BTL4	223 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms