RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 WDFY4Q6ZS81 3184 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 MUC6Q6W4X9 2439 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 MAN2B1O00754 1011 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 MDM4O15151 490 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 PAPSS1O43252 624 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 MMEP08473 750 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 CCDC172P0C7W6 258 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 IRF1P10914 325 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 ARSAP15289 507 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 FERP16591 822 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 CTHP32929 405 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 CLCN5P51795 746 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 KPNA1P52294 538 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 NOMO3P69849 1222 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 FMO1Q01740 532 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 EFEMP1Q12805 493 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 RUNX3Q13761 415 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 TRIM68Q6AZZ1 485 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 TRIM72Q6ZMU5 477 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 RALGPS2Q86X27 583 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 MSANTD4Q8NCY6 345 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 RNF214Q8ND24 703 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 PJA1Q8NG27 643 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 RNF139Q8WU17 664 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 SLC20A1Q8WUM9 679 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 NDRG1Q92597 394 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 PLD4Q96BZ4 506 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 MIS12Q9H081 205 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 EBF3Q9H4W6 596 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 ASNSD1Q9NWL6 643 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 GTSE1Q9NYZ3 720 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 IFNKQ9P0W0 207 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 LSM7Q9UK45 103 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 NUDT5Q9UKK9 219 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 MRPS17Q9Y2R5 130 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 ITIH6Q6UXX5 1313 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 FANCMQ8IYD8 2048 aa12.26□□□□□ -0.45
TRAFD1-209ENST00000552896 ATG2BQ96BY7 2078 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 A0A1W2PQJ5 194 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 KANSL1LA0AUZ9 987 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 SHISA7A6NL88 538 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 LRRC53A6NM62 1247 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 SPECC1L-ADORA2AF8WAN1 911 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 CBFA2T2O43439 604 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 GREM1O60565 184 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 STC2O76061 302 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 ERBB2P04626 1255 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 GLI1P08151 1106 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 AOC1P19801 751 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 SCNN1AP37088 669 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 COG7P83436 770 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 NNTQ13423 1086 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 OLFML1Q6UWY5 402 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 ZNF852Q6ZMS4 543 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 Q6ZNB5 142 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 TOGARAM2Q6ZUX3 1019 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 HTR3DQ70Z44 454 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 ZDHHC17Q8IUH5 632 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 SCUBE3Q8IX30 993 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 FLCNQ8NFG4 579 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 EDEM1Q92611 657 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 FAM149B1Q96BN6 582 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 OSBPL6Q9BZF3 934 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 XPO4Q9C0E2 1151 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 SYNCQ9H7C4 482 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 ECT2Q9H8V3 914 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 POPDC2Q9HBU9 364 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 LTB4R2Q9NPC1 389 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 TJP2Q9UDY2 1190 aa12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 HBS1LQ9Y450 684 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-209ENST00000552896 HSF2BPO75031 334 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 ADH1CP00326 375 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 CYP1A1P04798 512 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 CYP17A1P05093 508 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 CHRNB2P17787 502 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 GABRB2P47870 512 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 SOX9P48436 509 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 AMPD2Q01433 879 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 ARID5AQ03989 594 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 EFHC1Q5JVL4 640 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 NAA35Q5VZE5 725 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 FAM183BPQ6ZVS7 135 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 SLC26A9Q7LBE3 791 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 BBS7Q8IWZ6 715 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 CCDC105Q8IYK2 499 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 DOCK4Q8N1I0 1966 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 FAM3CQ92520 227 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 WBP2Q969T9 261 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 PIWIL1Q96J94 861 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 FOXQ1Q9C009 403 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 CACNA1IQ9P0X4 2223 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 NYNRINQ9P2P1 1898 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 ZNF510Q9Y2H8 683 aa12.24□□□□□ -0.45
TRAFD1-209ENST00000552896 MYO18AQ92614 2054 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 SLC12A8A0AV02 714 aa12.23□□□□□ -0.45
TRAFD1-209ENST00000552896 OTOL1A6NHN0 477 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms