RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DPY19L2P1Q6NXN4 242 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 MSANTD2Q6P1R3 559 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 SLC26A9Q7LBE3 791 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 FBXL6Q8N531 539 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 PPP1R9BQ96SB3 815 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 FAM83CQ9BQN1 747 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 TRIM5Q9C035 493 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 GKN1Q9NS71 199 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 CFAP97Q9P2B7 532 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 DENND4CQ5VZ89 1909 aa10.74□□□□□ -0.69
TRAFD1-208ENST00000552890 KANSL1LA0AUZ9 987 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 TEX33O43247 280 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 ATG13O75143 517 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 PRAMEF12O95522 483 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 APOEP02649 317 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 SERPING1P05155 500 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 CFHP08603 1231 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 MYBL1P10243 752 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 DRD1P21728 446 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 NOS2P35228 1153 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 PRKCIP41743 596 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 RGS7P49802 495 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 CDR1P51861 262 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 SLC6A3Q01959 620 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 GAD2Q05329 585 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 GRSF1Q12849 480 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 STXBP5Q5T5C0 1151 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 OR6B2Q6IFH4 312 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 DENND1BQ6P3S1 775 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 GPRIN1Q7Z2K8 1008 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 SCUBE3Q8IX30 993 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 SIX5Q8N196 739 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 OR8K1Q8NGG5 319 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 RSAD2Q8WXG1 361 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 NAP1L5Q96NT1 182 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 XPO6Q96QU8 1125 aaKnown RBP10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 CYP2S1Q96SQ9 504 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 AGPAT1Q99943 283 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 RNF38Q9H0F5 515 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 CCSER2Q9H7U1 834 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 LUC7LQ9NQ29 371 aaKnown RBP10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 TLR6Q9Y2C9 796 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 SIT1Q9Y3P8 196 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 PIAS3Q9Y6X2 628 aa10.73□□□□□ -0.69
TRAFD1-208ENST00000552890 PATJQ8NI35 1801 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 YJEFN3A6XGL0 299 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 E5RJQ4 531 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 E7ENQ6 273 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 CYP1A1P04798 512 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 MMP8P22894 467 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 CCR1P32246 355 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 PBX1P40424 430 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 RPS9P46781 194 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 OXCT1P55809 520 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 GSCP56915 257 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 CENPCQ03188 943 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 ARID5AQ03989 594 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 EFEMP1Q12805 493 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 GRM2Q14416 872 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 TRIP4Q15650 581 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 HSF5Q4G112 596 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 SCD5Q86SK9 330 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 CPXM2Q8N436 756 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 RNF214Q8ND24 703 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 KCNV2Q8TDN2 545 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 DDX1Q92499 740 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 FAM3CQ92520 227 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 ZSWIM1Q9BR11 485 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 DDX23Q9BUQ8 820 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 SLC2A11Q9BYW1 496 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 XPO4Q9C0E2 1151 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 SMOC2Q9H3U7 446 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 RETREG1Q9H6L5 497 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 ECT2Q9H8V3 914 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 MRPL47Q9HD33 250 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 SEPT11Q9NVA2 429 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 DONSONQ9NYP3 566 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 ADAM22Q9P0K1 906 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 RASAL2Q9UJF2 1139 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 NOCTQ9UK39 431 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 ARIH1Q9Y4X5 557 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 SCINQ9Y6U3 715 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 F5P12259 2224 aa10.72□□□□□ -0.69
TRAFD1-208ENST00000552890 SLC12A8A0AV02 714 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 LRRC53A6NM62 1247 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 NPC1O15118 1278 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 PAPSS1O43252 624 aaPredicted RBP10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 ERBB2P04626 1255 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 AOC1P19801 751 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 ABCB4P21439 1286 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 HNRNPH3P31942 346 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 MATKP42679 507 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 NOMO3P69849 1222 aa10.71□□□□□ -0.69
TRAFD1-208ENST00000552890 APBA1Q02410 837 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms