RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SMIM23A6NLE4 172 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 TCP11X1B4DZS4 312 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 TP73O15350 636 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 MAGEB2O15479 319 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 STBD1O95210 358 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 CCNE2O96020 404 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 OAS1P00973 400 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 PIGRP01833 764 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 C4BPAP04003 597 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ITGAVP06756 1048 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 DLATP10515 647 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 MYCLP12524 364 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 BRAFP15056 766 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 RRM1P23921 792 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 TBXAS1P24557 533 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 STX2P32856 288 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 PTPN7P35236 360 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 SKIV2L2P42285 1042 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 AP3M2P53677 418 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ITGA8P53708 1063 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 OAZ1P54368 228 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 IRX3P78415 501 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 IL9RQ01113 521 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 TAP1Q03518 808 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 MCL1Q07820 350 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 CCDC15Q0P6D6 951 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 BNIP1Q12981 228 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 STRN3Q13033 797 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 SPP2Q13103 211 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 CDK5R2Q13319 367 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 KLF1Q13351 362 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ACVR2BQ13705 512 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ZNF268Q14587 947 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 RASA2Q15283 850 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 UGCGQ16739 394 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ZACNQ401N2 412 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 RNF43Q68DV7 783 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 PLEKHA7Q6IQ23 1121 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 GPAT2Q6NUI2 795 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 HIBCHQ6NVY1 386 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 NSMFQ6X4W1 530 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ANO5Q75V66 913 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ANKS1BQ7Z6G8 1248 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ZNF227Q86WZ6 799 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ABRAQ8N0Z2 381 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ZCCHC9Q8N567 271 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 UHMK1Q8TAS1 419 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 RIN3Q8TB24 985 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 VWCEQ96DN2 955 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 SAAL1Q96ER3 474 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ZBED3Q96IU2 234 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 RBM41Q96IZ5 413 aaKnown RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 CFAP57Q96MR6 1250 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 FNBP1Q96RU3 617 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 JPH2Q9BR39 696 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 DHRS4Q9BTZ2 278 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ZNF341Q9BYN7 854 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 FRMD8P1Q9BZ68 369 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 OSBPL8Q9BZF1 889 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ATP6V0A4Q9HBG4 840 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 VEZTQ9HBM0 779 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 CD248Q9HCU0 757 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 KCNK9Q9NPC2 374 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ARHGEF4Q9NR80 690 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 PARVAQ9NVD7 372 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 PRR13Q9NZ81 148 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 NINJ2Q9NZG7 142 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ADAM22Q9P0K1 906 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 SENP1Q9P0U3 644 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 ARHGAP28Q9P2N2 729 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 NAALADL1Q9UQQ1 740 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 AKT3Q9Y243 479 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 STYXL1Q9Y6J8 313 aa6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 COL11A2P13942 1736 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-210ENST00000552620 MROH7Q68CQ1 1323 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 ADGRA3Q8IWK6 1321 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 TRBV23-1A0A0A0MS06 115 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 DYNC1LI2O43237 492 aaPredicted RBP6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 ATP9AO75110 1047 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 ATP2C2O75185 946 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 TJP3O95049 919 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 ACSL3O95573 720 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 ATP6V1G2O95670 118 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 IGHA1P01876 353 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 HLA-DRAP01903 254 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 RALAP11233 206 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 FGFR1P11362 822 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 NQO1P15559 274 aaKnown RBP6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 ACO1P21399 889 aaKnown RBP6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 KLRC2P26717 231 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 CHRNA5P30532 468 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 NF2P35240 595 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 CHKAP35790 457 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 MAGEA4P43358 317 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 SLCO1A2P46721 670 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 LIG4P49917 911 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 MAMLD1Q13495 774 aa6.29□□□□□ -1.4
CHMP4A-210ENST00000552620 SNX1Q13596 522 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms