RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 CHKAP35790 457 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 CCL23P55773 120 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 TSPY1Q01534 308 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 CAV1Q03135 178 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 TLE2Q04725 743 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 ZNF844Q08AG5 666 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 TFDP2Q14188 446 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 KRT81Q14533 505 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 MAPRE1Q15691 268 aaKnown RBP11.29□□□□□ -0.6
PFDN5-216ENST00000552341 P3H1Q32P28 736 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 FAM131BQ86XD5 332 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 UBLCP1Q8WVY7 318 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-216ENST00000552341 PGAP3Q96FM1 320 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-216ENST00000552341 KCTD15Q96SI1 283 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-216ENST00000552341 ZCWPW1Q9H0M4 648 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 RASSF4Q9H2L5 321 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 PCDH9Q9HC56 1237 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 WDR6Q9NNW5 1121 aaKnown RBP11.29□□□□□ -0.6
PFDN5-216ENST00000552341 PIGVQ9NUD9 493 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 VPS18Q9P253 973 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 ANAPC5Q9UJX4 755 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 ADAM28Q9UKQ2 775 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 FZD10Q9ULW2 581 aa11.29□□□□□ -0.6
PFDN5-216ENST00000552341 I6L893 689 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 M0QYT0 321 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 SYN3O14994 580 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 OPA1O60313 960 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 LTFP02788 710 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 AMHP03971 560 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 NUDT17P0C025 328 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 RBP3P10745 1247 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 CYP2F1P24903 491 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 CYP2C18P33260 490 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 EIF3EP60228 445 aaKnown RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 TRIM60Q495X7 471 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 PPP6R3Q5H9R7 873 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 PSTKQ8IV42 348 aaKnown RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 UNC45BQ8IWX7 931 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 PYROXD2Q8N2H3 581 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 CCHCR1Q8TD31 782 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 IRGQQ8WZA9 623 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 ZNF333Q96JL9 665 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 FAM193BQ96PV7 902 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 MAK16Q9BXY0 300 aaKnown RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 GPR62Q9BZJ7 368 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 DHX35Q9H5Z1 703 aaKnown RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 ADAM21Q9UKJ8 722 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 STAP1Q9ULZ2 295 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 COL4A6Q14031 1691 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 DCDC2CA8MYV0 355 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 GOLGA8KD6RF30 607 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 DNALI1O14645 258 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 TADA2AO75478 443 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 TGM2P21980 687 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 SLC11A1P49279 550 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 IZUMO3Q5VZ72 239 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 NPAS4Q8IUM7 802 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 ABI1Q8IZP0 508 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 SCAMP5Q8TAC9 235 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 DIS3LQ8TF46 1054 aaKnown RBP11.28□□□□□ -0.6
PFDN5-216ENST00000552341 P3H4Q92791 437 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 PWWP2AQ96N64 755 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 CSPG4P5Q96PW8 444 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 SLC9A7Q96T83 725 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 USP29Q9HBJ7 922 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 ANLNQ9NQW6 1124 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
PFDN5-216ENST00000552341 SGK1O00141 431 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 APOL1O14791 398 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 RIPK2O43353 540 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 PARNO95453 639 aaKnown RBP11.27□□□□□ -0.61
PFDN5-216ENST00000552341 SHBGP04278 402 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 RDXP35241 583 aaKnown RBP11.27□□□□□ -0.61
PFDN5-216ENST00000552341 NRLP54845 237 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 BCAR1P56945 870 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.61
PFDN5-216ENST00000552341 GPS1Q13098 491 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 EIF4EBP2Q13542 120 aaPredicted RBP11.27□□□□□ -0.61
PFDN5-216ENST00000552341 SLC29A2Q14542 456 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 ZSCAN26Q16670 478 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 SLC39A12Q504Y0 691 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 CEP85LQ5SZL2 805 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 RNASEH2BQ5TBB1 312 aaKnown RBP11.27□□□□□ -0.61
PFDN5-216ENST00000552341 C4orf50Q6ZRC1 276 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 B4GALNT4Q76KP1 1039 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.61
PFDN5-216ENST00000552341 SPATA2LQ8IUW3 424 aaPredicted RBP11.27□□□□□ -0.61
PFDN5-216ENST00000552341 RELL1Q8IUW5 271 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 BBOF1Q8ND07 529 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 RUFY1Q96T51 708 aa11.27□□□□□ -0.61
PFDN5-216ENST00000552341 FAM204AQ9H8W3 233 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms