RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PON2Q15165 354 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 TAF3Q5VWG9 929 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 BHLHA9Q7RTU4 235 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 DTWD2Q8NBA8 298 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 C1orf131Q8NDD1 294 aaKnown RBP19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 EDEM1Q92611 657 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 TRIM62Q9BVG3 475 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 SLC4A5Q9BY07 1137 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 LHX5Q9H2C1 402 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 RTN4Q9NQC3 1192 aaKnown RBP19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 MTF2Q9Y483 593 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 SLC12A8A0AV02 714 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 E5RJQ4 531 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 EPHB6O15197 1021 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 HMBSP08397 361 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 GJA4P35212 333 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 TXNDC11Q6PKC3 985 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 BBS7Q8IWZ6 715 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 TMEM35BQ8NCS4 154 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 CLEC4CQ8WTT0 213 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 PPP1R13BQ96KQ4 1090 aa19.34■□□□□ 0.69
PRPF40B-216ENST00000552301 OTOL1A6NHN0 477 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 TEX33O43247 280 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 GALR2O43603 387 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 GABBR2O75899 941 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 CYP17A1P05093 508 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 RPL34P49207 117 aaKnown RBP19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 JAM2P57087 298 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 GRSF1Q12849 480 aaKnown RBP eCLIP19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 DHCR24Q15392 516 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 HTR3DQ70Z44 454 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 TMEM110Q86TL2 294 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 SCUBE3Q8IX30 993 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 MSANTD4Q8NCY6 345 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 EPS8L1Q8TE68 723 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 DCLK3Q9C098 648 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 TSPY26PQ9H489 355 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 CYTH4Q9UIA0 394 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 ZNF510Q9Y2H8 683 aa19.33■□□□□ 0.68
PRPF40B-216ENST00000552301 A0A1B0GTH6 734 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 SHISA7A6NL88 538 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 CAPN9O14815 690 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 STC2O76061 302 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 ADH5P11766 374 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 DGKKQ5KSL6 1271 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 NOP9Q86U38 636 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 ZNF677Q86XU0 584 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 FMNL3Q8IVF7 1028 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 CD101Q93033 1021 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 WBP2Q969T9 261 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 PLD4Q96BZ4 506 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 CPXM1Q96SM3 734 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 P2RY13Q9BPV8 354 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 LMAN1LQ9HAT1 526 aa19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 SPATA6Q9NWH7 488 aaPredicted RBP19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 HBS1LQ9Y450 684 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-216ENST00000552301 PAPSS1O43252 624 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 LSM8O95777 96 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 CCDC172P0C7W6 258 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 NCAM1P13591 858 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 CORO1AP31146 461 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 RPS9P46781 194 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 PTPN5P54829 565 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 FANCCQ00597 558 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 GAD2Q05329 585 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 LY6G5CQ5SRR4 150 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 MSANTD2Q6P1R3 559 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 TOGARAM2Q6ZUX3 1019 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 ADGRG2Q8IZP9 1017 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 CLDN23Q96B33 292 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 IER2Q9BTL4 223 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 SFMBT1Q9UHJ3 866 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 MUC6Q6W4X9 2439 aa19.31■□□□□ 0.68
PRPF40B-216ENST00000552301 A0A1W2PQC6 194 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 TRDMT1O14717 391 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 MMEP08473 750 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 HARS2P49590 506 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 UBASH3AP57075 661 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 ARID5AQ03989 594 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 ANO4Q32M45 955 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 OR6B2Q6IFH4 312 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 LRSAM1Q6UWE0 723 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 WDTC1Q8N5D0 677 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 PRSS33Q8NF86 280 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 NAP1L5Q96NT1 182 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 IRF2BPLQ9H1B7 796 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 CHRDQ9H2X0 955 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 POPDC2Q9HBU9 364 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 SPHK2Q9NRA0 654 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 DLGAP2Q9P1A6 1054 aa19.3■□□□□ 0.68
PRPF40B-216ENST00000552301 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 MSI1O43347 362 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 LAMTOR5O43504 91 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 TPM3P06753 285 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 CHRNB1P11230 501 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 DRD1P21728 446 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 CDH5P33151 784 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 PLA2G5P39877 138 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 CDR2Q01850 454 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 PTPN20Q4JDL3 420 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms