RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 TSPAN3O60637 253 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 REC8O95072 547 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 FSBPO95073 299 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 SFTPCP11686 197 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 TYRP14679 529 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 ACP1P24666 158 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 DGKGP49619 791 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 COPAP53621 1224 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 GRIN1Q05586 938 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 STK3Q13188 491 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 ARL13BQ3SXY8 428 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 FAM26EQ8N5C1 309 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 WASF1Q92558 559 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 CCDC97Q96F63 343 aaPredicted RBP13.23□□□□□ -0.29
SNRPF-204ENST00000552085 BBS2Q9BXC9 721 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 LRRC4CQ9HCJ2 640 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 KCNG1Q9UIX4 513 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 CPSF3Q9UKF6 684 aaKnown RBP13.23□□□□□ -0.29
SNRPF-204ENST00000552085 L1RE1Q9UN81 338 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 C2CD2Q9Y426 696 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 ICE1Q9Y2F5 2266 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 NPC1O15118 1278 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 USP12O75317 370 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 SEMA4FO95754 770 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 CISD3P0C7P0 127 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 ANXA13P27216 316 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 EPHA8P29322 1005 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-204ENST00000552085 CCT6AP40227 531 aaKnown RBP13.22□□□□□ -0.29
SNRPF-204ENST00000552085 LIG4P49917 911 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 SMTNP53814 917 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 RACK1P63244 317 aaKnown RBP13.22□□□□□ -0.29
SNRPF-204ENST00000552085 SKOR1P84550 965 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 TAF10Q12962 218 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 ENPP2Q13822 863 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 SGO2Q562F6 1265 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 TMEM86AQ8N2M4 240 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 SKA1Q96BD8 255 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 SEMA3CQ99985 751 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 ORAI3Q9BRQ5 295 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 RUSC1Q9BVN2 902 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 ASB7Q9H672 318 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
SNRPF-204ENST00000552085 THAP10Q9P2Z0 257 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-204ENST00000552085 MAGEC2Q9UBF1 373 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-204ENST00000552085 UTP20O75691 2785 aaKnown RBP13.21□□□□□ -0.29
SNRPF-204ENST00000552085 COCHO43405 550 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 HCRTO43612 131 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 HUS1O60921 280 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 BDNFP23560 247 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 PCSK1P29120 753 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 CDC25AP30304 524 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 PNPLA4P41247 253 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 FOSBP53539 338 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 BCAT1P54687 386 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 INHBCP55103 352 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 NOP14P78316 857 aaKnown RBP13.21□□□□□ -0.29
SNRPF-204ENST00000552085 ASIC1P78348 528 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 CDCP2Q5VXM1 449 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 FAM171BQ6P995 826 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 OSTM1Q86WC4 334 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 SLITRK1Q96PX8 696 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 TRIM9Q9C026 710 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 DDX19AQ9NUU7 478 aaKnown RBP13.21□□□□□ -0.29
SNRPF-204ENST00000552085 MARK1Q9P0L2 795 aa13.21□□□□□ -0.29
SNRPF-204ENST00000552085 FAM87AP0C7U9 286 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 PLS3P13797 630 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 ACO1P21399 889 aaKnown RBP13.2□□□□□ -0.3
SNRPF-204ENST00000552085 MCM7P33993 719 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 AFMP43652 599 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 ARRB1P49407 418 aaPredicted RBP13.2□□□□□ -0.3
SNRPF-204ENST00000552085 CDH8P55286 799 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 BNIP3Q12983 259 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 ZSCAN23Q3MJ62 389 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 SFMBT2Q5VUG0 894 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 TDRD10Q5VZ19 366 aaKnown RBP13.2□□□□□ -0.3
SNRPF-204ENST00000552085 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 IGF2-ASQ6U949 168 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 C1orf186Q6ZWK4 172 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 EXTL1Q92935 676 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 WBP2Q969T9 261 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 MYLPFQ96A32 169 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 CCNL2Q96S94 520 aaPredicted RBP13.2□□□□□ -0.3
SNRPF-204ENST00000552085 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
SNRPF-204ENST00000552085 MSTO1Q9BUK6 570 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 BTBD1Q9H0C5 482 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 LHX5Q9H2C1 402 aa13.2□□□□□ -0.3
SNRPF-204ENST00000552085 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
SNRPF-204ENST00000552085 PTPRJQ12913 1337 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 A0A0B4J269 797 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 E9PMD0 336 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
SNRPF-204ENST00000552085 PFKFB2O60825 505 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 ATP2C2O75185 946 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 CSO75390 466 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms