RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 C1QAP02745 245 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 SESN3P58005 492 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 OLFML1Q6UWY5 402 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 TTC30AQ86WT1 665 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 SKA1Q96BD8 255 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 PTCD3Q96EY7 689 aaKnown RBP13.52□□□□□ -0.24
CACNB3-219ENST00000551544 LPIN3Q9BQK8 851 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 MRPL45Q9BRJ2 306 aaKnown RBP13.52□□□□□ -0.24
CACNB3-219ENST00000551544 NFKBIZQ9BYH8 718 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 CXCL16Q9H2A7 254 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 TLE6Q9H808 572 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 PLAC1Q9HBJ0 212 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.24
CACNB3-219ENST00000551544 ITGA11Q9UKX5 1188 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 CYB561D2O14569 222 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 HNRNPCL1O60812 293 aaKnown RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 ZNF286BP0CG31 522 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 TMPRSS15P98073 1019 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 FAM187BQ17R55 369 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 KHDC1Q4VXA5 237 aaKnown RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 LGSNQ5TDP6 509 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 TRMT10BQ6PF06 316 aaKnown RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 MOB2Q70IA6 237 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 ALYREFQ86V81 257 aaKnown RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 VPS52Q8N1B4 723 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 MPP5Q8N3R9 675 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 OXNAD1Q96HP4 312 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 ZNF395Q9H8N7 513 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-219ENST00000551544 RNF19AQ9NV58 838 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 ZFATQ9P243 1243 aa13.52□□□□□ -0.25
CACNB3-219ENST00000551544 BCLAF3A2AJT9 711 aaKnown RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 SLC15A5A6NIM6 579 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 I3L4J1 428 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 FCHO1O14526 889 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 GSC2O15499 205 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 TGDSO95455 350 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 METTL18O95568 372 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 APOEP02649 317 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 LGALS2P05162 132 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 CSH1P0DML2 217 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 CSH2P0DML3 217 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 KITP10721 976 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 ESRRAP11474 423 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 CYP2F1P24903 491 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 SLC6A3Q01959 620 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 GBE1Q04446 702 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 MROH9Q5TGP6 573 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 SLC9A4Q6AI14 798 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 UNC5AQ6ZN44 842 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 C4orf50Q6ZRC1 276 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 C7orf31Q8N865 590 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 MCUR1Q96AQ8 359 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 DHX35Q9H5Z1 703 aaKnown RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 PCMTD2Q9NV79 361 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 GINS2Q9Y248 185 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 PLLPQ9Y342 182 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 DNAJC25-GNG10A0A024R161 153 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 PPEF2O14830 753 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 CPA2P48052 419 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 PTDSS1P48651 473 aaKnown RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 HDAC4P56524 1084 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 MRPS5P82675 430 aaKnown RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 BST1Q10588 318 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 CHI3L2Q15782 390 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 ZNF484Q5JVG2 852 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 RTP4Q96DX8 246 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 NMUR2Q9GZQ4 415 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 NRDE2Q9H7Z3 1164 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 MARCOQ9UEW3 520 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-219ENST00000551544 KIAA1257Q9ULG3 409 aa13.51□□□□□ -0.25
CACNB3-219ENST00000551544 RFPL1O75677 317 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 LINGO3P0C6S8 592 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 GRIA1P42261 906 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-219ENST00000551544 APLFQ8IW19 511 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-219ENST00000551544 ENDOVQ8N8Q3 282 aaKnown RBP13.5□□□□□ -0.25
CACNB3-219ENST00000551544 SH3TC2Q8TF17 1288 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 CLEC4CQ8WTT0 213 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 TEKT4Q8WW24 435 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 SH3GL3Q99963 347 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 TUBB6Q9BUF5 446 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 FRMD8Q9BZ67 464 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-219ENST00000551544 HESX1Q9UBX0 185 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 C2CD2Q9Y426 696 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 PTPRFP10586 1907 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 DPYSL4O14531 572 aa13.5□□□□□ -0.25
CACNB3-219ENST00000551544 TRDMT1O14717 391 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 353.9 ms