RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 OXTRP30559 389 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 PDE6CP51160 858 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 ZSCAN23Q3MJ62 389 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 SLC39A4Q6P5W5 647 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 ZPBP2Q6X784 338 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 ADAT2Q7Z6V5 191 aaKnown RBP14.33□□□□□ -0.12
SNRPF-203ENST00000551316 SPATA2LQ8IUW3 424 aaPredicted RBP14.33□□□□□ -0.12
SNRPF-203ENST00000551316 FAM26EQ8N5C1 309 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
SNRPF-203ENST00000551316 ZNF768Q9H5H4 540 aaKnown RBP14.33□□□□□ -0.12
SNRPF-203ENST00000551316 POLR1BQ9H9Y6 1135 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 TBC1D14Q9P2M4 693 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 CPSF3Q9UKF6 684 aaKnown RBP14.33□□□□□ -0.12
SNRPF-203ENST00000551316 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.12
SNRPF-203ENST00000551316 E9PMD0 336 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 RNF224P0DH78 156 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 CKMT2P17540 419 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 PFKLP17858 780 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 BDNFP23560 247 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 ACP1P24666 158 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 CD27P26842 260 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 LSSP48449 732 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 RAD51AP2Q09MP3 1159 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
SNRPF-203ENST00000551316 TAF10Q12962 218 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 STK3Q13188 491 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 ORC1Q13415 861 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 ILKQ13418 452 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 STARD3Q14849 445 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 GEN1Q17RS7 908 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 C3orf38Q5JPI3 329 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 TPGS1Q6ZTW0 290 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 DENND5BQ6ZUT9 1274 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 KCNK18Q7Z418 384 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 PTRH1Q86Y79 214 aaKnown RBP14.32□□□□□ -0.12
SNRPF-203ENST00000551316 FBXL16Q8N461 479 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 SORCS1Q8WY21 1168 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 PRR11Q96HE9 360 aaPredicted RBP14.32□□□□□ -0.12
SNRPF-203ENST00000551316 ACBD6Q9BR61 282 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 CCSER2Q9H7U1 834 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 CRTAC1Q9NQ79 661 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 PLK2Q9NYY3 685 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 SATB2Q9UPW6 733 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 PTPRJQ12913 1337 aa14.32□□□□□ -0.12
SNRPF-203ENST00000551316 TISP43B9A030 160 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 TRIM38O00635 465 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 VILLO15195 856 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 CSO75390 466 aaKnown RBP14.31□□□□□ -0.12
SNRPF-203ENST00000551316 SEMA4FO95754 770 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 MAGEA11P43364 429 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 PGFP49763 221 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 OTUB2Q96DC9 234 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 BBS2Q9BXC9 721 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 PCED1AQ9H1Q7 454 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 THSD1Q9NS62 852 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 THAP10Q9P2Z0 257 aaPredicted RBP14.31□□□□□ -0.12
SNRPF-203ENST00000551316 SEPT3Q9UH03 358 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 NME7Q9Y5B8 376 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 SNX14Q9Y5W7 946 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 SCN8AQ9UQD0 1980 aa14.31□□□□□ -0.12
SNRPF-203ENST00000551316 MED13Q9UHV7 2174 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 CASC3O15234 703 aaKnown RBP14.3□□□□□ -0.12
SNRPF-203ENST00000551316 OGTO15294 1046 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 SDC3O75056 442 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
SNRPF-203ENST00000551316 DGKGP49619 791 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 STRN3Q13033 797 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 KRT32Q14532 448 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 CLCA4Q14CN2 919 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 ZNF787Q6DD87 383 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 FAM177A1Q8N128 213 aaPredicted RBP14.3□□□□□ -0.12
SNRPF-203ENST00000551316 ZNF366Q8N895 744 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 RBBP8NLQ8NC74 664 aaPredicted RBP14.3□□□□□ -0.12
SNRPF-203ENST00000551316 FUBP3Q96I24 572 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNRPF-203ENST00000551316 MMS19Q96T76 1030 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 ACE2Q9BYF1 805 aaPredicted RBP14.3□□□□□ -0.12
SNRPF-203ENST00000551316 DDX19AQ9NUU7 478 aaKnown RBP14.3□□□□□ -0.12
SNRPF-203ENST00000551316 KIAA1024Q9UPX6 916 aa14.3□□□□□ -0.12
SNRPF-203ENST00000551316 A0A1W2PR77 199 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 F8VP50 259 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 ACO1P21399 889 aaKnown RBP14.29□□□□□ -0.12
SNRPF-203ENST00000551316 ACOT2P49753 483 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 C21orf59P57076 290 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 ZNF234Q14588 700 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 SV2CQ496J9 727 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 FAM171BQ6P995 826 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 DDX42Q86XP3 938 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNRPF-203ENST00000551316 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
SNRPF-203ENST00000551316 LHX5Q9H2C1 402 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 IKZF4Q9H2S9 585 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 LRRC4CQ9HCJ2 640 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 MARK1Q9P0L2 795 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 SH3BP1Q9Y3L3 701 aa14.29□□□□□ -0.12
SNRPF-203ENST00000551316 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
SNRPF-203ENST00000551316 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.29□□□□□ -0.12
SNRPF-203ENST00000551316 A0A1B0GVM2 712 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 SIGLEC6O43699 453 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms