RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
PTCH1-221ENST00000550914 SEMA3BQ13214 749 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 CLEC20AQ6ZU45 233 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 PIP4P1Q86T03 277 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 MIB1Q86YT6 1006 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 GRAMD1CQ8IYS0 662 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 C12orf29Q8N999 325 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 DEFB124Q8NES8 71 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 GABRG3Q99928 467 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 BBS2Q9BXC9 721 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 TMEM121BQ9BXQ6 578 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-221ENST00000550914 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 IMPG2Q9BZV3 1241 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 DNAI2Q9GZS0 605 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 CAPN10Q9HC96 672 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 FAM49BQ9NUQ9 324 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 HMGXB4Q9UGU5 601 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 SERTAD1Q9UHV2 236 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 RCOR1Q9UKL0 485 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-221ENST00000550914 IGHV1OR15-9A0A0B4J2B8 117 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 C1QTNF9BB2RNN3 333 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 HHLA1C9JL84 531 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 NEDD8-MDP1E9PL57 170 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-221ENST00000550914 KIF20AO95235 890 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 TBX18O95935 607 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 HLA-DRAP01903 254 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 CFIP05156 583 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 C1QTNF9P0C862 333 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 PIK3CAP42336 1068 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 MAPK8P45983 427 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 PLA2G4AP47712 749 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-221ENST00000550914 ZNF33AQ06730 810 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 NFIL3Q16649 462 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 KMT5BQ4FZB7 885 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 EGFLAMQ63HQ2 1017 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 Q6ZNB5 142 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 CHPFQ8IZ52 775 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
PTCH1-221ENST00000550914 CDK5RAP1Q96SZ6 601 aaKnown RBP13.55□□□□□ -0.24
PTCH1-221ENST00000550914 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 NT5C1AQ9BXI3 368 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTCH1-221ENST00000550914 OSER1Q9NX31 292 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 DNMT3LQ9UJW3 386 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 ZNF510Q9Y2H8 683 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
PTCH1-221ENST00000550914 BAHCC1Q9P281 2608 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 CABIN1Q9Y6J0 2220 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 A0A1W2PQD8 194 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 PRRT4C9JH25 899 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 NPC1O15118 1278 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 TRIM24O15164 1050 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 CYP26A1O43174 497 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 CISD3P0C7P0 127 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 NDUFV2P19404 249 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 ACO1P21399 889 aaKnown RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 ADORA2BP29275 332 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 DGKGP49619 791 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 VAMP7P51809 220 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 KIF11P52732 1056 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 ZNF132P52740 706 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 ATXN3P54252 364 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 ORC1Q13415 861 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 HNRNPDQ14103 355 aaKnown RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 E2F5Q15329 346 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 FOXD4L5Q5VV16 416 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 SPOPLQ6IQ16 392 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 INTS8Q75QN2 995 aaKnown RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 GPRIN1Q7Z2K8 1008 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 CCDC186Q7Z3E2 898 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 HDDC3Q8N4P3 179 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 FOXD4L4Q8WXT5 416 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-221ENST00000550914 GATA6Q92908 595 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 ELMO3Q96BJ8 720 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 CYFIP2Q96F07 1278 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 FAXDC2Q96IV6 333 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 CLIC5Q9NZA1 410 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 FBXO10Q9UK96 956 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 ZMIZ1Q9ULJ6 1067 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 SLC27A6Q9Y2P4 619 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 NEUROG3Q9Y4Z2 214 aa13.54□□□□□ -0.24
PTCH1-221ENST00000550914 A0A1W2PQH9 124 aa13.53□□□□□ -0.24
PTCH1-221ENST00000550914 H0Y626 953 aa13.53□□□□□ -0.24
PTCH1-221ENST00000550914 ARHGAP33O14559 1287 aa13.53□□□□□ -0.24
PTCH1-221ENST00000550914 OPHN1O60890 802 aa13.53□□□□□ -0.24
PTCH1-221ENST00000550914 CILPO75339 1184 aa13.53□□□□□ -0.24
PTCH1-221ENST00000550914 TRIM16O95361 564 aa13.53□□□□□ -0.24
PTCH1-221ENST00000550914 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
PTCH1-221ENST00000550914 SYPP08247 313 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms