RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 DEUP1Q05D60 604 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 PTK6Q13882 451 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 BTG3Q14201 252 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 PPP1R7Q15435 360 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 EFHC2Q5JST6 749 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 SPOUT1Q5T280 376 aaKnown RBP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 DAB2IPQ5VWQ8 1189 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 TPGS2Q68CL5 300 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 DUPD1Q68J44 220 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 KIAA1841Q6NSI8 718 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 ADAT2Q7Z6V5 191 aaKnown RBP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 NUP93Q8N1F7 819 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 MAFAQ8NHW3 353 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 HSPH1Q92598 858 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 LRRC45Q96CN5 670 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 HAUS1Q96CS2 278 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 FAF2Q96CS3 445 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 VWCEQ96DN2 955 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 CALN1Q9BXU9 219 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 CHST7Q9NS84 486 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 MTRF1LQ9UGC7 380 aaKnown RBP13.09□□□□□ -0.31
CACNB3-217ENST00000550483 SCML2Q9UQR0 700 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 NR2E1Q9Y466 385 aa13.09□□□□□ -0.31
CACNB3-217ENST00000550483 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.31
CACNB3-217ENST00000550483 TCRBV7S2A1N4TA0A589 114 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 E7ENQ6 273 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 H3BRJ5 948 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 M0QYT0 321 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 SMAPO00193 183 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 MCF2LO15068 1137 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 LIASO43766 372 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 CST8O60676 142 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 USP17L7P0C7H9 530 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 NCAM1P13591 858 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 NR2C2P49116 596 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
CACNB3-217ENST00000550483 FPGSQ05932 587 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 CALCOCO2Q13137 446 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
CACNB3-217ENST00000550483 DPYSL3Q14195 570 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 HLTFQ14527 1009 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNB3-217ENST00000550483 CCDC142Q17RM4 750 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 KCNT1Q5JUK3 1230 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 BRMS1LQ5PSV4 323 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 BSPRYQ5W0U4 402 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 BTBD8Q5XKL5 378 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 TXNRD3NBQ6F5E7 133 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 CYP4V2Q6ZWL3 525 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-217ENST00000550483 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
CACNB3-217ENST00000550483 RFX6Q8HWS3 928 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 ZDHHC14Q8IZN3 488 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 MREGQ8N565 214 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 MYLIPQ8WY64 445 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 CCDC114Q96M63 670 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 PEBP4Q96S96 227 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 TMEM209Q96SK2 561 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 FOXP3Q9BZS1 431 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 PCDH18Q9HCL0 1135 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.32
CACNB3-217ENST00000550483 IL37Q9NZH6 218 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 WHRNQ9P202 907 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 RAD54BQ9Y620 910 aa13.08□□□□□ -0.32
CACNB3-217ENST00000550483 FNDC1Q4ZHG4 1894 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-217ENST00000550483 SCN5AQ14524 2016 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 FAM92AA1XBS5 289 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 MTMR11A4FU01 709 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 APOL1O14791 398 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 FGBP02675 491 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-217ENST00000550483 SLC2A3P11169 496 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 ITIH2P19823 946 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 CYP2F1P24903 491 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 STIP1P31948 543 aaKnown RBP13.07□□□□□ -0.32
CACNB3-217ENST00000550483 HCAR3P49019 387 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 GLUD2P49448 558 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 NDUFV1P49821 464 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
CACNB3-217ENST00000550483 DSG1Q02413 1049 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 KRT17Q04695 432 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 MTMR3Q13615 1198 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 PSMD5Q16401 504 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms