RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, human

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-206	ENST00000550406	GKN1	Q9NS71	199 aa		13.65	□□□□□ -0.22
RAB5C-206	ENST00000550406	PRKAG3	Q9UGI9	489 aa		13.65	□□□□□ -0.22
RAB5C-206	ENST00000550406	ZMYM5	Q9UJ78	669 aa		13.65	□□□□□ -0.22
RAB5C-206	ENST00000550406	NR2E1	Q9Y466	385 aa		13.65	□□□□□ -0.22
RAB5C-206	ENST00000550406	MYOF	Q9NZM1	2061 aa		13.65	□□□□□ -0.22
RAB5C-206	ENST00000550406	SIGLEC16	A6NMB1	481 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	HSF2BP	O75031	334 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	DAB1	O75553	588 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	LCA5L	O95447	670 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	MBL2	P11226	248 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	NCAM1	P13591	858 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	TFE3	P19532	575 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	ATP5C1	P36542	298 aa	Known RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	FLT3	P36888	993 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	GALC	P54803	685 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	RNASE9	P60153	205 aa	Known RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	EFEMP1	Q12805	493 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	C10orf120	Q5SQS8	335 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	OTUD1	Q5VV17	481 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	PLEKHA7	Q6IQ23	1121 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	PPP1R2P3	Q6NXS1	205 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	TOGARAM2	Q6ZUX3	1019 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	TMTC1	Q8IUR5	882 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	PLCD3	Q8N3E9	789 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	EMC1	Q8N766	993 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	C3orf20	Q8ND61	904 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	ARHGEF26	Q96DR7	871 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	NECAB3	Q96P71	396 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	BAG1	Q99933	345 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	DDX23	Q9BUQ8	820 aa	Known RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	POPDC2	Q9HBU9	364 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	METTL5	Q9NRN9	209 aa	Known RBP	13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	TDP1	Q9NUW8	608 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	SMPD4	Q9NXE4	827 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	CALCOCO1	Q9P1Z2	691 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	WDR35	Q9P2L0	1181 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	SFMBT1	Q9UHJ3	866 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	STRIP2	Q9ULQ0	834 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	ARHGAP26	Q9UNA1	814 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	CPQ	Q9Y646	472 aa		13.64	□□□□□ -0.23
RAB5C-206	ENST00000550406	HEPACAM2	A8MVW5	462 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	GREM1	O60565	184 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	IGLV3-25	P01717	112 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	CKM	P06732	381 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	AVPR1A	P37288	418 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	GSDMD	P57764	484 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	RPL7A	P62424	266 aa	Known RBP	13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	MAMLD1	Q13495	774 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	ZNF77	Q15935	545 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	RAB6C	Q53S08	254 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	VIT	Q6UXI7	678 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	ARC	Q7LC44	396 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	CCDC170	Q8IYT3	715 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	DQX1	Q8TE96	717 aa	Known RBP	13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	NT5C3B	Q969T7	300 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	ELSPBP1	Q96BH3	223 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	ZNF653	Q96CK0	615 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	KXD1	Q9BQD3	176 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	RAB6C	Q9H0N0	254 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	THAP2	Q9H0W7	228 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	DEF6	Q9H4E7	631 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	KCNK12	Q9HB15	430 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	ZFP14	Q9HCL3	533 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	MARCH2	Q9P0N8	246 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	CNOT8	Q9UFF9	292 aa	Known RBP	13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	RASAL2	Q9UJF2	1139 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	DNMT3L	Q9UJW3	386 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	REXO2	Q9Y3B8	237 aa	Known RBP	13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	NUMBL	Q9Y6R0	609 aa		13.63	□□□□□ -0.23
RAB5C-206	ENST00000550406	TICRR	Q7Z2Z1	1910 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	COL4A2	P08572	1712 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	ANKRD62	A6NC57	917 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	C2CD4B	A6NLJ0	364 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	EIF3CL	B5ME19	914 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	LEFTY2	O00292	366 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	MSI1	O43347	362 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	ECI2	O75521	394 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	CYP1A2	P05177	515 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	ASGR2	P07307	311 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	TCF3	P15923	654 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	ABCB4	P21439	1286 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	NOS2	P35228	1153 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	RFC1	P35251	1148 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	MATK	P42679	507 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	OGDH	Q02218	1023 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	USP4	Q13107	963 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	DCAF6	Q58WW2	860 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	TJAP1	Q5JTD0	557 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	RSRC2	Q7L4I2	434 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	BNIPL	Q7Z465	357 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	TAC4	Q86UU9	113 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	LRRC8A	Q8IWT6	810 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	ADAM32	Q8TC27	787 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	SH3RF2	Q8TEC5	729 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	RNF139	Q8WU17	664 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	RXFP2	Q8WXD0	754 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	GOLGA1	Q92805	767 aa		13.62	□□□□□ -0.23

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