RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PREPLQ4J6C6 727 aaPredicted RBP8.08□□□□□ -1.12
NEK3-201ENST00000550331 ZNF667Q5HYK9 610 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 EOGTQ5NDL2 527 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 HECTD3Q5T447 861 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 ATL3Q6DD88 541 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 ANO7Q6IWH7 933 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 RHBDF2Q6PJF5 856 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 FAM35AQ86V20 835 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 IL17RCQ8NAC3 791 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 OLIG1Q8TAK6 271 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 KCNV2Q8TDN2 545 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 PARD3BQ8TEW8 1205 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 SMARCD1Q96GM5 515 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 BLZF1Q9H2G9 400 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 SLC39A2Q9NP94 309 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 DMAP1Q9NPF5 467 aaPredicted RBP8.08□□□□□ -1.12
NEK3-201ENST00000550331 ARHGEF4Q9NR80 690 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 IL37Q9NZH6 218 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 OBSL1O75147 1896 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 MYO16Q9Y6X6 1858 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 KIAA1549LQ6ZVL6 1849 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 PI4KAP42356 2102 aa8.08□□□□□ -1.12
NEK3-201ENST00000550331 CACNA1EQ15878 2313 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 LRRIQ3A6PVS8 624 aaPredicted RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 CLDN5O00501 218 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 TNFRSF10BO14763 440 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 KHNYNO15037 678 aaKnown RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 HOXC11O43248 304 aaPredicted RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 COCHO43405 550 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 C4BPAP04003 597 aaKnown RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 RPN1P04843 607 aaKnown RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 ZDHHC11BP0C7U3 371 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 ZSCAN22P10073 491 aaPredicted RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 ADH5P11766 374 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 P4HA1P13674 534 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CEACAM1P13688 526 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 BCKDHBP21953 392 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CASP1P29466 404 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 DPP6P42658 865 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 TNFRSF4P43489 277 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 KIR2DL1P43626 348 aaPredicted RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 SLC6A11P48066 632 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CASP4P49662 377 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 SLC5A3P53794 718 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CDH8P55286 799 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 GAD2Q05329 585 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 IFRD2Q12894 506 aaPredicted RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 BIRC3Q13489 604 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CUL4BQ13620 913 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 BYSLQ13895 437 aaKnown RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 SPDYCQ5MJ68 293 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 RESP18Q5W5W9 173 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 BTBD8Q5XKL5 378 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 PAQR9Q6ZVX9 377 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CYP2U1Q7Z449 544 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 TRMT11Q7Z4G4 463 aaKnown RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 C12orf40Q86WS4 652 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 SLC9A9Q8IVB4 645 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 ETFBKMTQ8IXQ9 262 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CEP57L1Q8IYX8 460 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 FUKQ8N0W3 1084 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 PHTF2Q8N3S3 785 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 CCDC33Q8N5R6 958 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 ALLCQ8N6M5 410 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 TXNDC5Q8NBS9 432 aaKnown RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 FBXO32Q969P5 355 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 SNX21Q969T3 373 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 SPACA7Q96KW9 195 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 KCNK16Q96T55 309 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 TPSD1Q9BZJ3 242 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 SMYD3Q9H7B4 428 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 POLMQ9NP87 494 aaPredicted RBP8.07□□□□□ -1.12
NEK3-201ENST00000550331 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 DMAC2Q9NW81 257 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 PCDHA7Q9UN72 937 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 INVSQ9Y283 1065 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 SH3BP1Q9Y3L3 701 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 GTF3C3Q9Y5Q9 886 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 TCHHQ07283 1943 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 DENND4CQ5VZ89 1909 aa8.07□□□□□ -1.12
NEK3-201ENST00000550331 ITPR1Q14643 2758 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 ANTXRLA6NF34 631 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 SGK1O00141 431 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 TAF4O00268 1085 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 SCAMP3O14828 347 aaKnown RBP8.06□□□□□ -1.12
NEK3-201ENST00000550331 IKBKBO14920 756 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 CLSTN1O94985 981 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 KLF8O95600 359 aaPredicted RBP8.06□□□□□ -1.12
NEK3-201ENST00000550331 F13A1P00488 732 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 MYL1P05976 194 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 SLFN14P0C7P3 912 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 HNRNPLP14866 589 aaKnown RBP eCLIP8.06□□□□□ -1.12
NEK3-201ENST00000550331 CSRP1P21291 193 aaKnown RBP8.06□□□□□ -1.12
NEK3-201ENST00000550331 HOXD12P35452 270 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 P2RY2P41231 377 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 AFMP43652 599 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms