RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	CLCN5	P51795	746 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	KPNA1	P52294	538 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	FANCC	Q00597	558 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	FMO1	Q01740	532 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	STIL	Q15468	1287 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	ITPRIPL2	Q3MIP1	535 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	FSTL4	Q6MZW2	842 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	TRNP1	Q6NT89	227 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283		Q6ZNB5	142 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	TMEM110	Q86TL2	294 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	DNAAF5	Q86Y56	855 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	TMEM25	Q86YD3	366 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	SUGP1	Q8IWZ8	645 aa	Known RBP	11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	SIX6OS1	Q8N1H7	587 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	RNF214	Q8ND24	703 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	ADAM32	Q8TC27	787 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	CSGALNACT1	Q8TDX6	532 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	FAM3C	Q92520	227 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	MYEOV	Q96EZ4	313 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	HSFY1	Q96LI6	401 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	PHOX2B	Q99453	314 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	TTYH3	Q9C0H2	523 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	CNGB3	Q9NQW8	809 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	ST7	Q9NRC1	585 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	CLIC5	Q9NZA1	410 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	CALCOCO1	Q9P1Z2	691 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	ZMYM5	Q9UJ78	669 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	NAALADL1	Q9UQQ1	740 aa		11.75	□□□□□ -0.53
RAB5B-208	ENST00000550283	SLC12A8	A0AV02	714 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	GRAP2	O75791	330 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	GJB6	O95452	261 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	EGF	P01133	1207 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	TFE3	P19532	575 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	SOX5	P35711	763 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	IFNAR2	P48551	515 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	PLCB2	Q00722	1185 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	ARID5A	Q03989	594 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	PTK2	Q05397	1052 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	PDGFRL	Q15198	375 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	DHCR24	Q15392	516 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	LY6G5C	Q5SRR4	150 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	OTUD1	Q5VV17	481 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	KLHDC10	Q6PID8	442 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	LRSAM1	Q6UWE0	723 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	FAM183BP	Q6ZVS7	135 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	PHLDB2	Q86SQ0	1253 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	SCML4	Q8N228	414 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	ZNF276	Q8N554	614 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	NEK11	Q8NG66	645 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	CLDN23	Q96B33	292 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	SYT11	Q9BT88	431 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	LHX5	Q9H2C1	402 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	THG1L	Q9NWX6	298 aa	Known RBP	11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	MARCH2	Q9P0N8	246 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	DNMT3L	Q9UJW3	386 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	SIT1	Q9Y3P8	196 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	VPS13A	Q96RL7	3174 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	MYOF	Q9NZM1	2061 aa		11.74	□□□□□ -0.53
RAB5B-208	ENST00000550283	E2F8	A0AVK6	867 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	TRDMT1	O14717	391 aa	Known RBP	11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	MED7	O43513	233 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	LTF	P02788	710 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	DMD	P11532	3685 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	CDH5	P33151	784 aa	Predicted RBP	11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	GALK1	P51570	392 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	SGSH	P51688	502 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	SLC8A3	P57103	927 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	NOMO3	P69849	1222 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	NHLH1	Q02575	133 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	MEA1	Q16626	185 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	RAB6C	Q53S08	254 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	BTBD8	Q5XKL5	378 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	MSANTD2	Q6P1R3	559 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	OLFML1	Q6UWY5	402 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	ZNF852	Q6ZMS4	543 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	HTR3D	Q70Z44	454 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	IRF2BP2	Q7Z5L9	587 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	FMNL3	Q8IVF7	1028 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	PHTF2	Q8N3S3	785 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	PIP4P2	Q8N4L2	257 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	DTWD2	Q8NBA8	298 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	SLC30A5	Q8TAD4	765 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	DQX1	Q8TE96	717 aa	Known RBP	11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	STK32A	Q8WU08	396 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	CPA5	Q8WXQ8	436 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	PPP1R13B	Q96KQ4	1090 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	FAM81B	Q96LP2	452 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	DNAI2	Q9GZS0	605 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	NACA2	Q9H009	215 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	RAB6C	Q9H0N0	254 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	LMAN1L	Q9HAT1	526 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	ZDHHC4	Q9NPG8	344 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	FAM86C1	Q9NVL1	165 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	XPO7	Q9UIA9	1087 aa	Known RBP	11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	AGO1	Q9UL18	857 aa	Known RBP	11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	HCN2	Q9UL51	889 aa		11.73	□□□□□ -0.53
RAB5B-208	ENST00000550283	CLEC4E	Q9ULY5	219 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms