RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZSCAN16Q9H4T2 348 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 CYLDQ9NQC7 956 aa10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 TLR8Q9NR97 1041 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 DNAJC17Q9NVM6 304 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 GMIPQ9P107 970 aa10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 SUSD2Q9UGT4 822 aa10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 FBXO10Q9UK96 956 aa10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 NFE2L3Q9Y4A8 694 aa10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 PLXNB3Q9ULL4 1909 aa10.42□□□□□ -0.74
TRAFD1-207ENST00000550051 UBE4BO95155 1302 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 PRRT4C9JH25 899 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 CLIC2O15247 247 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 SH3BP5O60239 455 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 PHACTR2O75167 634 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 AP1G2O75843 785 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 TYRP14679 529 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 GNSP15586 552 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 ATP5C1P36542 298 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 WASP42768 502 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 NASPP49321 788 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 CYP2J2P51589 502 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 PLEKHG6Q3KR16 790 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 ZNF667Q5HYK9 610 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 FAM26FQ5R3K3 315 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 KLHDC10Q6PID8 442 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 CCNI2Q6ZMN8 369 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 GLRX5Q86SX6 157 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 ZNF276Q8N554 614 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 IQUBQ8NA54 791 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 LINC00301Q8NCQ3 95 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 OR2I1PQ8NGU4 316 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 PARD3BQ8TEW8 1205 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 HSPA12BQ96MM6 686 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 SMOQ99835 787 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 MED10Q9BTT4 135 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 BBS2Q9BXC9 721 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 NACA2Q9H009 215 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 SMYD3Q9H7B4 428 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 UPF2Q9HAU5 1272 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 ITM2CQ9NQX7 267 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■■■■ 41.9
TRAFD1-207ENST00000550051 KIAA1522Q9P206 1035 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 SCML2Q9UQR0 700 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 ZFYVE26Q68DK2 2539 aa10.41□□□□□ -0.74
TRAFD1-207ENST00000550051 DSPP15924 2871 aaKnown RBP10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 PTPRBP23467 1997 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 NEDD8-MDP1E9PL57 170 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 NPC1O15118 1278 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 PPP6R2O75170 966 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 NDUFS2O75306 463 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 BEST1O76090 585 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 TBX18O95935 607 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 PLA2G4AP47712 749 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 GOLGA8FQ08AF8 430 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 GOLGA8DPQ0D2H9 430 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 ENPP2Q13822 863 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 KNOP1Q1ED39 458 aaKnown RBP10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 SGSM1Q2NKQ1 1148 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 WDR45BQ5MNZ6 344 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 DBX2Q6ZNG2 339 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 TOGARAM2Q6ZUX3 1019 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 UNC13DQ70J99 1090 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 ACOT1Q86TX2 421 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 UNC93AQ86WB7 457 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 RGL4Q8IZJ4 473 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 CADM4Q8NFZ8 388 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 PLEKHO2Q8TD55 490 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 CAMK1GQ96NX5 476 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 SDCBP2Q9H190 292 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 DMAC2Q9NW81 257 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 CYP8B1Q9UNU6 501 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 SLC27A6Q9Y2P4 619 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 GPSM3Q9Y4H4 160 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 PCDHB9Q9Y5E1 797 aa10.4□□□□□ -0.74
TRAFD1-207ENST00000550051 A0A1B0GTW7 788 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 PVALEFA0A1B0GWK0 134 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 WASH3PC4AMC7 463 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 HHLA1C9JL84 531 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 EXOC3O60645 756 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 CBFA2T3O75081 653 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 VNN1O95497 513 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 RPN1P04843 607 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 ZNF883P0CG24 379 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 IRF1P10914 325 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 P4HA1P13674 534 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 ACO1P21399 889 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 CD6P30203 668 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 DGKGP49619 791 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 CASP4P49662 377 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 MAP3K7CLP57077 242 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 ASIC1P78348 528 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 SCAPQ12770 1279 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 NCOA4Q13772 614 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 E2F5Q15329 346 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 Q6ZNB5 142 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 TPGS1Q6ZTW0 290 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 SLC9A9Q8IVB4 645 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 NAXDQ8IW45 347 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 NELFCDQ8IXH7 590 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms